DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34437 and Prss42

DIOPT Version :9

Sequence 1:NP_001097955.1 Gene:CG34437 / 5740179 FlyBaseID:FBgn0085466 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_001100333.2 Gene:Prss42 / 301027 RGDID:1562548 Length:340 Species:Rattus norvegicus


Alignment Length:274 Identity:68/274 - (24%)
Similarity:118/274 - (43%) Gaps:48/274 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TLVLAHQGSAY---FLDFECVNHKPHQDVF-----KETPWMAFIASPTKN---CSGTLINKQYVI 64
            |..:|.|||..   |.:|..|..:|...:.     :|..|...::...::   |.|:|:|.|:|:
  Rat    56 TSKVASQGSTTRFPFTNFSIVCGQPLMKIMGGVDAEEGKWPWQVSLRVRHMHVCGGSLLNSQWVL 120

  Fly    65 TTASCVFDQSESTVFLGRFDNIPQNRNRYVKHSVQSVYTHKLYNKQT-FEHDIALLLLDDPVTFK 128
            |.|.|:..:.:..|.:|  |.....:|..:...:|:::.|..::..| .::|||||.|..||.|.
  Rat   121 TAAHCIHSRVQYNVKMG--DRSVYRQNTSLVIPIQNIFVHPKFSTTTVVQNDIALLKLQQPVNFT 183

  Fly   129 MSIQPICIWLGEITNLNHLESNR------WGLSE-------KMIFQRINTVKIL------KIKKC 174
            .||.|||:..|..    |:::..      ||..:       ..|.|.::...||      .:||.
  Rat   184 SSIHPICVPTGTF----HVKAGTKCWVTGWGKPDPGAPQIPTEILQEVDQSIILYEECNEMLKKM 244

  Fly   175 RDSFGITLKKSQICAGFQNGNICTETGSSLVKQIHYSGKLWNTLIGIQSYGVSERC-------IY 232
            ..:....:|:..:||..:.|....:..|.......:..: | ..||:.|:|:.  |       :|
  Rat   245 ASTSVDLVKRGMVCAYKEGGKDACQGDSGGPLSCEFDNR-W-VQIGVVSWGIG--CGRKGHPGVY 305

  Fly   233 NKIAHYIDWIVGVV 246
            ..:|.|..|::.||
  Rat   306 TDVAFYNKWLITVV 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34437NP_001097955.1 Tryp_SPc 39..242 CDD:214473 56/232 (24%)
Tryp_SPc 39..242 CDD:304450 56/232 (24%)
Prss42NP_001100333.2 Tryp_SPc 83..314 CDD:214473 56/240 (23%)
Tryp_SPc 84..315 CDD:238113 56/240 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.