DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34437 and svh-1

DIOPT Version :9

Sequence 1:NP_001097955.1 Gene:CG34437 / 5740179 FlyBaseID:FBgn0085466 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:239 Identity:61/239 - (25%)
Similarity:103/239 - (43%) Gaps:50/239 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 PWMAFI---ASPTKNCSGTLINKQYVITTASCVFDQSEST----VFLGRFDNIPQNRNRYVKHSV 98
            ||.|.:   |:...:|..::::|.::||.|.| |::.|..    |.:|.:||...:.|..:.: :
 Worm   725 PWTAALRNKATKAHHCGASILDKTHLITAAHC-FEEDERVSSYEVVVGDWDNNQTDGNEQIFY-L 787

  Fly    99 QSVYTHKLYNKQTFEHDIALLLLDDP-VTFKMSIQPICIWLGEI--TNLNHLESNRWGLSEKMIF 160
            |.::.:.|| |..|.||||:|.:..| :.|....||||:...:.  |.......:.||.......
 Worm   788 QRIHFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCVVSGWGSMGLRYA 851

  Fly   161 QRINTVKILKIKK--CRDSFGI--TLKKSQICAGFQNGNI------------CTETGSSLVKQIH 209
            :|:....|..|.:  |.:|..|  ::.:|..|||:..|.|            |.....:.|    
 Worm   852 ERLQAALIPIINRFDCVNSSQIYSSMSRSAFCAGYLEGGIDSCQGDSGGPFACRREDGAFV---- 912

  Fly   210 YSGKLWNTLIGIQSYGVSERC-------IYNKIAHYIDWIVGVV 246
                    |.|:.|:|  :.|       ||..:|.|:.||..::
 Worm   913 --------LAGVISWG--DGCAQKKQPGIYTMVAPYLSWISAII 946

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34437NP_001097955.1 Tryp_SPc 39..242 CDD:214473 59/233 (25%)
Tryp_SPc 39..242 CDD:304450 59/233 (25%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SRCR_2 599..681 CDD:382996
Tryp_SPc 713..945 CDD:238113 61/236 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24258
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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