DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drgx and AtHB23

DIOPT Version :10

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_564268.1 Gene:AtHB23 / 839587 AraportID:AT1G26960 Length:255 Species:Arabidopsis thaliana


Alignment Length:197 Identity:43/197 - (21%)
Similarity:82/197 - (41%) Gaps:29/197 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 DETFVRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWR 108
            |.:.:..|:||    ..::||:.||..|...:..:...:.:||..:.|...::.:|||||||:.:
plant    64 DGSKMGEKKRR----LNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAIWFQNRRARSK 124

  Fly   109 KAERLKD-EQRKRENGESSSSLDKLHDSRESSPDITGEIDDDMDDLPPRQRSHSPLANGQMEQQH 172
            ..:..|| :..||:       .:.|.|..|.......::...:..|    :|..|:.:..:.::.
plant   125 TKQLEKDYDMLKRQ-------FESLRDENEVLQTQNQKLQAQVMAL----KSREPIESINLNKET 178

  Fly   173 SHSHSHSHSRSPGGGMHLDSSDNERPLSSNQLTAT----PHSASQ--------SLGSISAGSPSP 225
            ..|.| ..|.:..|.:.....|::..|.....|.|    .:|:|:        |:.::..|....
plant   179 EGSCS-DRSENISGDIRPPEIDSQFALGHPPTTTTMQFFQNSSSEQRMVKEENSISNMFCGIDDQ 242

  Fly   226 SG 227
            ||
plant   243 SG 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 17/55 (31%)
OAR 428..446 CDD:461067
AtHB23NP_564268.1 HOX 71..124 CDD:197696 18/56 (32%)
HALZ 126..167 CDD:460477 9/51 (18%)
Blue background indicates that the domain is not in the aligned region.

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