DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drgx and Isx

DIOPT Version :10

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001387929.1 Gene:Isx / 682968 RGDID:1592776 Length:242 Species:Rattus norvegicus


Alignment Length:198 Identity:66/198 - (33%)
Similarity:88/198 - (44%) Gaps:32/198 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PTLDYPFAATHPYTSYSYHPAIHDETFVRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDL 85
            ||.|.|                .:|   |:.:||.|||||.:||:|||..|..|||||:..|..|
  Rat    66 PTQDQP----------------QEE---RKNKRRVRTTFTTEQLQELEKLFHFTHYPDIHVRSQL 111

  Fly    86 AMKINLTEARVQVWFQNRRAKWRKAERLKDEQRKRENGESSSSLDKLH--DSRESSPDITGEIDD 148
            |.:|||.|||||:||||:||||||.|:.......::.|..:.:....|  .:....|.::   |.
  Rat   112 ASRINLPEARVQIWFQNQRAKWRKQEKSGSLSAPQQPGSCTDAHCSAHIGATHRMLPPLS---DS 173

  Fly   149 DMDDLPPRQRSHSPLANGQMEQQHSHSHS-------HSHSRSPGGGMHLDSSDNERPLS-SNQLT 205
            ....|.|...|..|:|..........||.       |..:..|..|.||.:::.....| ..|.|
  Rat   174 ARFKLVPCPDSPCPMAPMGPAAPAWPSHPAALCPYLHPPTPKPQVGQHLCNANIRTGFSLPKQAT 238

  Fly   206 ATP 208
            ..|
  Rat   239 LLP 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 37/55 (67%)
OAR 428..446 CDD:461067
IsxNP_001387929.1 Homeodomain 79..135 CDD:459649 37/55 (67%)
Blue background indicates that the domain is not in the aligned region.

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