DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drgx and Barx2

DIOPT Version :10

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001414382.1 Gene:Barx2 / 679701 RGDID:1584840 Length:290 Species:Rattus norvegicus


Alignment Length:150 Identity:40/150 - (26%)
Similarity:58/150 - (38%) Gaps:34/150 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 RRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRK---- 109
            ::|.||:||.||..||..||..|.:..|.....|.|||..:.||:.:|:.|:||||.||:|    
  Rat   141 QKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLK 205

  Fly   110 --------------------AERLKDEQRKRENGESSSSLDKLHDSRESS----------PDITG 144
                                :|.::.|::.....:|...|..|....|..          |....
  Rat   206 GGQEAPTKPKGRPKKNSIPTSEEIEAEEKMNSQAQSQEQLGSLQGQEEPRDPQEPKACLVPLEVA 270

  Fly   145 EIDDDMDDLPPRQRSHSPLA 164
            |......:||.......||:
  Rat   271 EPSQQPQELPEASSEPPPLS 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 26/55 (47%)
OAR 428..446 CDD:461067
Barx2NP_001414382.1 None
Blue background indicates that the domain is not in the aligned region.

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