DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drgx and nkx3-1

DIOPT Version :10

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001373254.1 Gene:nkx3-1 / 555375 ZFINID:ZDB-GENE-081104-238 Length:185 Species:Danio rerio


Alignment Length:73 Identity:29/73 - (39%)
Similarity:43/73 - (58%) Gaps:4/73 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 KQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRK----AE 111
            |::|:|..||..|:.|||..|::..|.....|..||..::|||.:|::||||||.|.::    .|
Zfish    68 KKKRSRAAFTHLQVLELEKKFSRQRYLSAPERTHLASALHLTETQVKIWFQNRRYKTKRRQLTTE 132

  Fly   112 RLKDEQRK 119
            ..||..:|
Zfish   133 HSKDYFQK 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 24/55 (44%)
OAR 428..446 CDD:461067
nkx3-1NP_001373254.1 COG5576 15..>136 CDD:227863 26/67 (39%)
Homeodomain 70..126 CDD:459649 24/55 (44%)
Blue background indicates that the domain is not in the aligned region.

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