DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drgx and ems

DIOPT Version :10

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster


Alignment Length:209 Identity:59/209 - (28%)
Similarity:82/209 - (39%) Gaps:64/209 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YQCPPAL---HPCGPH---------PPR----LPTLDYPFAATHPYTSYSYHPAIHDETFVR--- 49
            :|...||   |..||.         ||.    :|.   |..|...|..|.:..:.|...|..   
  Fly   316 FQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMPN---PGMARDSYQLYPWLLSRHGRIFPHRFP 377

  Fly    50 --------RKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAK 106
                    ||.:|.||.|:..||.:||.||....|.....|:.||..:||:|.:|:|||||||.|
  Fly   378 GSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTK 442

  Fly   107 WRKAERLKDE-------QRKRENGESSSSLDKLHDSRESSPDITGEIDDDMDDLPPRQRSHSPLA 164
            .::.:: :||       ||...||......|:|             ||.:||:.|          
  Fly   443 HKRMQQ-EDEKGGEGGSQRNMHNGSGDEDDDEL-------------IDMEMDECP---------- 483

  Fly   165 NGQMEQQHSHSHSH 178
               .:::|....||
  Fly   484 ---SDEEHELDASH 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 26/55 (47%)
OAR 428..446 CDD:461067
emsNP_731868.1 Homeodomain 389..445 CDD:459649 26/55 (47%)
Blue background indicates that the domain is not in the aligned region.

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