DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drgx and Rhox12

DIOPT Version :9

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001020254.1 Gene:Rhox12 / 382282 MGIID:2685994 Length:186 Species:Mus musculus


Alignment Length:79 Identity:33/79 - (41%)
Similarity:50/79 - (63%) Gaps:0/79 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 VRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAER 112
            |||.:.|.:..||.:||.|||..|.:|.|||..||::||..:.|.|::||.||:.|||.:||.::
Mouse   106 VRRTRPRIQLGFTPRQLNELEDFFEKTKYPDALTRKNLAKHLYLAESKVQRWFKKRRAHYRKEQQ 170

  Fly   113 LKDEQRKRENGESS 126
            .:..|....:|:.:
Mouse   171 SQVLQCASADGQDA 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeobox 56..108 CDD:278475 25/51 (49%)
OAR 428..445 CDD:281777
Rhox12NP_001020254.1 homeodomain 107..169 CDD:238039 30/61 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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