DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drgx and gsb

DIOPT Version :10

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster


Alignment Length:312 Identity:94/312 - (30%)
Similarity:137/312 - (43%) Gaps:92/312 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 VRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAER 112
            ::|||||:||||:..|::.||..||:|.||||:|||:||....||||||||||.||||:.||  :
  Fly   181 LKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRK--Q 243

  Fly   113 LKDEQRKRENGESSSSLDKLHDSRESSPDITGEIDDDMDDLPPRQRSHSPLANGQMEQQHSHSHS 177
            |..:|                                   :|    |.:|.:.     ....:.:
  Fly   244 LNTQQ-----------------------------------VP----SFAPTST-----SFGATPT 264

  Fly   178 HSHSRSPGGGMHLDSSDNERPLSSNQLTATPHSASQSLGSISAGSPSPSGMHREREHTPLVGGGG 242
            .|.:.:|..||.|.||.: .|.|.    |..:.|:.. ||:::.||:.|               .
  Fly   265 TSAAPAPNMGMSLYSSQS-WPSSG----AYENHAAYG-GSVASMSPASS---------------T 308

  Fly   243 QGPSSPSNSRNTDSPIEVGGPMSLTTGSRMAASSNNSASSTPT-PTTPHA-PQMPHSSA------ 299
            .|.||.::     ||::...... .|||....|:....||..| |:..:: ||.|.:||      
  Fly   309 SGTSSAAH-----SPVQTQAQQP-GTGSEFMTSTYGVGSSNATYPSAAYSMPQTPATSAEQLRSQ 367

  Fly   300 -AAAAAFGSHIFG-----NFGG-----GSNASDSNCGFRPVLSEQSAVAAAA 340
             |:|||.|||...     ||.|     .|.|.:...|:...:.::|::...|
  Fly   368 FASAAASGSHHPSTWDSYNFAGSFFPPASAAGNHISGYHHQVDQKSSMMTTA 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 35/55 (64%)
OAR 428..446 CDD:461067
gsbNP_523863.1 PAX 19..143 CDD:128645
Homeodomain 186..242 CDD:459649 35/55 (64%)
Blue background indicates that the domain is not in the aligned region.

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