DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Drgx and Dll

DIOPT Version :10

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster


Alignment Length:161 Identity:37/161 - (22%)
Similarity:50/161 - (31%) Gaps:48/161 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 QLTN--PSLAEQQHPQHQQQQVP-------PLHQHQHHPAQSPQMQASSPTTISAPLLTPTKTTP 73
            ||.|  |:..|:.........:|       ....:|..|..|.|    .|.|........|||..
  Fly    87 QLINKLPTPLEESKTADNNSTMPEPETMRIAFRYNQLTPVDSEQ----KPATSLGHYFDLTKTMS 147

  Fly    74 PDVAHTPSGAAPGAPGANFNEELAPELTQQGWRKFWSKRE---GRPYF--WNKLTGESLWEPPQL 133
            ||:.                  ||.::|      .|:..|   ..|.|  :|.....||....:.
  Fly   148 PDML------------------LAHDVT------CWNGGELETNAPEFGSFNNPHYASLLSCIRS 188

  Fly   134 NRGPPQFDPLTDP-----LGICSTSPLNGPL 159
            ..|..||:..:|.     |.||..| :..||
  Fly   189 KAGEQQFNAASDESSKNVLRICLNS-MGSPL 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 10/55 (18%)
OAR 428..446 CDD:461067
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 18/83 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.