DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drgx and Rx

DIOPT Version :9

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_726006.3 Gene:Rx / 37367 FlyBaseID:FBgn0020617 Length:904 Species:Drosophila melanogaster


Alignment Length:429 Identity:124/429 - (28%)
Similarity:159/429 - (37%) Gaps:115/429 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 DETFVRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWR 108
            |:...::|.||||||||..||.|||.||.::|||||::||:||||:||.|.||||||||||||||
  Fly   551 DDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 615

  Fly   109 KAERLKD--------EQRKRENGESSSSLDKLHDSRESSP---DITGEIDDDMDDLPPRQRSHSP 162
            :.|:.:.        .|.....|..:|.|..  |...|.|   .:.|.:.......|........
  Fly   616 RQEKSESLRLGLTHFTQLPHRLGCGASGLPV--DPWLSPPLLSALPGFLSHPQTVYPSYLTPPLS 678

  Fly   163 LANGQ--MEQQHSHSHSHSHSRSP----GGGMHLDSSDNERPLSSNQLTATPHSASQSLGSISAG 221
            ||.|.  |....:..|.|:|:..|    |.|.|........|        .||           |
  Fly   679 LAPGNLTMSSLAAMGHHHAHNGPPPPHVGHGGHGQPQPPPPP--------PPH-----------G 724

  Fly   222 SPSPSGMHREREHTPLVGGGGQGPSSPSNSRNTDSPIEVGGPMSLTTGSRMAASSNNSASSTPTP 286
            .|.|.|.|..   .||      ...||..||.:.....:|.|               ....||..
  Fly   725 VPHPHGSHHV---VPL------SHLSPHLSRMSPHATSLGSP---------------HHGVTPLG 765

  Fly   287 TTPHAPQMPHSSAAAAAAFGSHIFGNFGGGSNASDSNCGFRPVLSEQSAVAAAAAAAAAQRSANH 351
            |..|:...|.|:|...|...|.     ...|:||....|....:|.|:.....|.:....|..: 
  Fly   766 TPLHSSLPPSSTATTVAVSSSQ-----SSSSSASLECSGPDVCMSPQNLSIGNADSNGDGRDLS- 824

  Fly   352 PPLFLPPHLAAQFTHQPLFPGLKGVSPFQSLCSCCSL-----------KPPPPPGSSVVAPLSIP 405
                           ..|..|....:|..||..|.:.           .||||           |
  Fly   825 ---------------SDLDAGSTSSNPGSSLDKCAASANIELLDVGRDSPPPP-----------P 863

  Fly   406 VSSSSAASSPESPKSSGQGSVHDPRSNSVAELRRKAQEH 444
            ..:...:|:|.:          |.||||:|.||.||:||
  Fly   864 TPTGKGSSTPPT----------DMRSNSIATLRIKAKEH 892

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeobox 56..108 CDD:278475 38/51 (75%)
OAR 428..445 CDD:281777 12/17 (71%)
RxNP_726006.3 Homeobox 563..615 CDD:278475 38/51 (75%)
OAR 876..892 CDD:281777 10/15 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D143142at50557
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24329
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.020

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