DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Drgx and PDX1

DIOPT Version :10

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_000200.1 Gene:PDX1 / 3651 HGNCID:6107 Length:283 Species:Homo sapiens


Alignment Length:331 Identity:69/331 - (20%)
Similarity:95/331 - (28%) Gaps:155/331 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YQCPPA--------LH------------PCGPHP----------PRLPTLDYPF---AATHPYT- 34
            |:.||.        ||            |.||.|          |....|.:|:   ...|.:. 
Human    68 YEVPPLADDPAVAHLHHHLPAQLALPHPPAGPFPEGAEPGVLEEPNRVQLPFPWMKSTKAHAWKG 132

  Fly    35 -----SYSYHPAIHDETFVRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEA 94
                 :|:..|         .:.:|.||.:|..||.|||..|....|.....|.:||:.:||||.
Human   133 QWAGGAYAAEP---------EENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTER 188

  Fly    95 RVQVWFQNRRAKWRKAERLKDEQRKRENGESSSSLDKLHDSRESSPDITGEIDDDMDDLPPRQRS 159
            .:::||||||.||:     |:|.:||..|                                    
Human   189 HIKIWFQNRRMKWK-----KEEDKKRGGG------------------------------------ 212

  Fly   160 HSPLANGQMEQQHSHSHSHSHSRSPGGGMHLDSSDNERPLSSNQLTATPHSASQSLGSISAGSPS 224
                                  .:.|||...:...:....|..:|.|.|             .|.
Human   213 ----------------------TAVGGGGVAEPEQDCAVTSGEELLALP-------------PPP 242

  Fly   225 PSGMHREREHTPLVGGGGQGPSSPSNSRNTDSPIEVGGPMSLTTGSRMAASSNNSASSTPTPTTP 289
            |.             ||...|::|..:|....|                  ...|||..|:...|
Human   243 PP-------------GGAVPPAAPVAAREGRLP------------------PGLSASPQPSSVAP 276

  Fly   290 HAPQMP 295
            ..||.|
Human   277 RRPQEP 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 26/55 (47%)
OAR 428..446 CDD:461067
PDX1NP_000200.1 Transactivation domain. /evidence=ECO:0000250 13..73 2/4 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..71 1/2 (50%)
Antp-type hexapeptide 118..123 1/4 (25%)
Homeodomain 147..203 CDD:459649 26/60 (43%)
Nuclear localization signal. /evidence=ECO:0000250 197..203 4/10 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..283 29/189 (15%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.