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Protein Alignment Drgx and Rhox12
DIOPT Version :9
Sequence 1: | NP_001097075.2 |
Gene: | Drgx / 5740176 |
FlyBaseID: | FBgn0085369 |
Length: | 587 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001020072.1 |
Gene: | Rhox12 / 363437 |
RGDID: | 1563789 |
Length: | 175 |
Species: | Rattus norvegicus |
Alignment Length: | 76 |
Identity: | 32/76 - (42%) |
Similarity: | 47/76 - (61%) |
Gaps: | 2/76 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 49 RRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAERL 113
||.:.|.:...|.:||.|||..|..|.||||.||.:||..:.|.|:||:.||:.|||::||.:
Rat 101 RRTRPRIQLGLTPRQLSELEDFFETTKYPDVITRRNLAKHLYLAESRVKRWFKRRRARYRKEQ-- 163
Fly 114 KDEQRKRENGE 124
:.:..||.:.:
Rat 164 QTQMLKRASAD 174
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Drgx | NP_001097075.2 |
Homeobox |
56..108 |
CDD:278475 |
25/51 (49%) |
OAR |
428..445 |
CDD:281777 |
|
Rhox12 | NP_001020072.1 |
homeodomain |
101..163 |
CDD:238039 |
30/61 (49%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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