DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Drgx and Vsx1

DIOPT Version :10

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_572232.2 Gene:Vsx1 / 31470 FlyBaseID:FBgn0263511 Length:837 Species:Drosophila melanogaster


Alignment Length:455 Identity:111/455 - (24%)
Similarity:145/455 - (31%) Gaps:199/455 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 AATHPYTSYSYHP----AIHDETFV----------------------------------RRKQRR 54
            |..|.:.:::.|.    |.|.|.|:                                  :.|:|.
  Fly   333 AHVHAHAAHAAHAAHAHAHHAEAFLGAAGGAGGNPNSLLAAHGGDVLVGPGGTGPGGKKKNKRRH 397

  Fly    55 NRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRK---------- 109
            .||.||..||||||.||.:.|||||..||.|:||..|.|.|:|||:|||||||||          
  Fly   398 GRTIFTSSQLEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKCWGHSTK 462

  Fly   110 ---------------------------------------------AERLKDEQRKRENGES---- 125
                                                         ||.||.::..||...|    
  Fly   463 MAEYGLYGAMVRHSLPLPETIIKSAKEDESVAPWLLGMHKKSLEAAELLKSDESDRETPTSDDTN 527

  Fly   126 -SSSLDKLHDSRESSPDITGEIDDDMDDLPPRQRSHSPLANGQMEQQH-----SHSHSHSHSRSP 184
             |.|....|:|..||..|:..:   .|..||...|    |.|:....|     .|.|:|.|:::.
  Fly   528 TSYSAGSTHNSPISSFSISRLL---FDAPPPAAGS----AGGKGHHHHHHHHKGHHHAHVHAQAQ 585

  Fly   185 GGG--------------------MHLDSSDNERPLSSNQLTATPHSASQSLGSISAGSPSPSGMH 229
            ...                    .||.:::|.  |...|:..|        || .:||.|.||  
  Fly   586 AHAHMLLHHQQQQQQQQQQQQHHHHLHAAENS--LQQQQVAGT--------GS-GSGSGSGSG-- 637

  Fly   230 REREHTPLVGGGGQGPSS--PSNSRNTDSPIEVGGPMSLTTGSRMAASSNNSASSTPTPTTPHAP 292
                    .|.|..||.:  |.|.:           ..|....::.................|..
  Fly   638 --------TGAGSTGPPAHHPYNQQ-----------QHLHHLQQLQQQQQQQQQQAQQQQQHHHH 683

  Fly   293 Q-------MPHSSAAAAAAFGSHIFGNFGGGSNASDSNCGFRPVLSEQSAVAAAAAAAAAQRSAN 350
            |       |.|.:|||..|                            ::||||||||||...:||
  Fly   684 QHHHSVHHMHHHNAAAGYA----------------------------EAAVAAAAAAAAVAAAAN 720

  Fly   351  350
              Fly   721  720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 36/55 (65%)
OAR 428..446 CDD:461067
Vsx1NP_572232.2 Homeodomain 395..452 CDD:459649 36/56 (64%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.