DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drgx and Vsx2

DIOPT Version :9

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001284897.1 Gene:Vsx2 / 31469 FlyBaseID:FBgn0263512 Length:645 Species:Drosophila melanogaster


Alignment Length:602 Identity:158/602 - (26%)
Similarity:223/602 - (37%) Gaps:210/602 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YQCPPALHPCGPH-----PPRLPTLDYPFAATHPYTSYSYHPAIHDETF---------------- 47
            :|..|..||..||     ||..|    |....||:  :.:||.:|.:.|                
  Fly   144 HQHHPHHHPHHPHGAVGGPPPPP----PMQHHHPH--HPHHPLLHAQGFPQLKSFAAGAGTCLPG 202

  Fly    48 -----------------------VRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKI 89
                                   .::|:|.:||.||..|||:||.||.:.|||||:.||.|::|.
  Fly   203 SLAPKDFGMESLNGFGVGPNSKKKKKKRRHSRTIFTSYQLEKLEEAFKEAHYPDVYAREMLSLKT 267

  Fly    90 NLTEARVQVWFQNRRAKWRKAERLKDEQRKRENGESSSSLDKLHDS--RES--SPDITGEIDDDM 150
            .|.|.|:|||||||||||||.|::       ..|.:..:...|:.:  |.|  .||...:...|.
  Fly   268 ELPEDRIQVWFQNRRAKWRKTEKV-------WGGSTIMAEYGLYGAMVRHSLPLPDTILKSAKDN 325

  Fly   151 DDLPPRQRSHSPLANGQMEQQHSHSHS---HSHSRSPGG-GMHLDSSDNERPLSSNQLTATPHSA 211
            |.:.|....        |||:..|..|   .|..:...| ..|.||:.::...|.:...:..|:.
  Fly   326 DAVAPWLLG--------MEQKCMHRKSIEAQSALKDDSGVSDHEDSAGSKSAHSEDLSRSRCHAL 382

  Fly   212 SQSLGSISAGSPSPSGMHREREHTPLVGGGGQGPSSPSNSRNTDSPIEVGGPMSLTTGSRMAASS 276
            |.|..|::..||:||..                |:|.|.|....|.....|..|....:...||:
  Fly   383 SSSTESLNVVSPAPSSC----------------PTSASTSAPPTSTSGYAGAASSAATTPTGAST 431

  Fly   277 NNSASS------TPTPTTPHAPQMPHSSAAAAAAF---GSHIFG-------------NFGGGSNA 319
            .||:||      :|:|......|:.......|:.:   |:.:.|             | ..|:.|
  Fly   432 TNSSSSPHIELGSPSPQQQQHLQLQQQQQQQASLYLGAGAVVTGCAPPSYHPLLDAAN-AAGAGA 495

  Fly   320 SDSNCGFRPVLSEQSAVAAAAAAAAAQRSANHPPLFLPPHLAAQFTHQ---PLFPGLKGVSPFQS 381
            :.|:..|..:::  :|||||||||..|            |...|...|   ...|||.       
  Fly   496 AASSKDFHMIMN--TAVAAAAAAAQQQ------------HQQQQQQQQQATATAPGLH------- 539

  Fly   382 LCSCCSLKPPPPPGSSVVAPLSIPVSSSSAASSPESPKSSGQGSVHDP---RSNSVAELRRKAQE 443
                                     :.:.||:..|          |||   |:||:|.||.||||
  Fly   540 -------------------------AHNLAAALME----------HDPDAFRNNSIACLRAKAQE 569

  Fly   444 HSAALLQSLHAAAAAGLAFPGLHLPPLSFAHHPALGQHVV-----------NHNNNNTMRM--KH 495
            |.|.||.:           .||.|....||.    ||..:           .||||:.:.:  .|
  Fly   570 HQARLLNN-----------GGLFLQVRRFAQ----GQAQIQDPSDMLKLSEEHNNNSPIPIPPAH 619

  Fly   496 EA--------QDMTMNG 504
            ..        .::|.||
  Fly   620 STVNTQVNVKMELTANG 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeobox 56..108 CDD:278475 33/51 (65%)
OAR 428..445 CDD:281777 12/19 (63%)
Vsx2NP_001284897.1 Homeobox 233..286 CDD:278475 33/52 (63%)
OAR 556..570 CDD:281777 9/13 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D454642at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.920

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