DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drgx and pax7a

DIOPT Version :10

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_571400.1 Gene:pax7a / 30587 ZFINID:ZDB-GENE-990415-201 Length:507 Species:Danio rerio


Alignment Length:265 Identity:89/265 - (33%)
Similarity:126/265 - (47%) Gaps:45/265 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 VRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAER 112
            ::|||||:|||||.:||||||.||.:|||||::|||:||.:..||||||||||.||||:|||   
Zfish   216 LKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRK--- 277

  Fly   113 LKDEQRKRENGESSSSLDKLHDSRESSPDITGEIDDDMDDLPPRQRSHSPLANGQMEQQHSHSHS 177
                         .:..::|.......|.  |.....|..||..|...|...:..:.|..|.:..
Zfish   278 -------------QAGANQLAAFNHLLPG--GFPPTGMPTLPTYQLPESTYPSTTLSQDGSSTLH 327

  Fly   178 HSHSRSPG----GGMHLDS------SDNERPLSS-NQLTATPHSASQSLGSISAG-SP------- 223
            ......|.    ||:..||      |.|....|| ::...:|.::|..:..:|.| ||       
Zfish   328 RPQPLPPSSMHQGGLSADSGSAYGLSSNRHTFSSYSETFMSPTASSNHMNPVSNGLSPQVMSILS 392

  Fly   224 SPSGMHREREH----TPLVGG-GGQGPSSPSNSRNTDSPIEVGGPMSLTTGSRMAASSNNSASST 283
            :||.:..:.:|    :||.|| ....|.|.|.|:.:| ||:  ...||.:.......:.::.|.:
Zfish   393 NPSAVPSQPQHDFSISPLHGGLEASNPISASCSQRSD-PIK--SVDSLASTQSYCPPTYSATSYS 454

  Fly   284 PTPTT 288
            ..|.|
Zfish   455 VDPVT 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 40/55 (73%)
OAR 428..446 CDD:461067
pax7aNP_571400.1 PAX 34..166 CDD:238076
Homeodomain 221..277 CDD:459649 40/55 (73%)
Pax7 343..386 CDD:403540 11/42 (26%)
Blue background indicates that the domain is not in the aligned region.

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