DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drgx and rx3

DIOPT Version :9

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_571302.1 Gene:rx3 / 30474 ZFINID:ZDB-GENE-990415-238 Length:292 Species:Danio rerio


Alignment Length:202 Identity:77/202 - (38%)
Similarity:107/202 - (52%) Gaps:35/202 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 IHDETFVRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAK 106
            :.|:...::|.||||||||..||.|||.||.::|||||::||:||:|:||.|.||||||||||||
Zfish    96 LSDDENPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAK 160

  Fly   107 WRKAERLKDEQRKRENGESS------SSLDKLHDSRESSPDITGEI---DDDMDDLP----PRQ- 157
            ||:.|:|:....|.:  |||      |....|.......|.:||.|   ...:..||    |:| 
Zfish   161 WRRQEKLEVSSIKLQ--ESSMLSIPRSGPLSLGSGLPLEPWLTGPISTSSSPLQSLPSFITPQQA 223

  Fly   158 --RSHSP---LANGQMEQQHSHSHSHSHSRSP----GGGMHLDSSDNERP----LSSNQLTATPH 209
              .|::|   |::..:    :||..|..:..|    .|.|...|.....|    ::|.::.|..|
Zfish   224 VPASYTPPQFLSSSTL----NHSLPHIGAVCPPYQCSGFMDKFSLQEADPRNTSIASLRMKAKEH 284

  Fly   210 SASQSLG 216
              .||:|
Zfish   285 --IQSIG 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeobox 56..108 CDD:278475 37/51 (73%)
OAR 428..445 CDD:281777
rx3NP_571302.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
Octapeptide motif 32..39
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 53..72
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 85..107 2/10 (20%)
Homeobox 110..162 CDD:278475 37/51 (73%)
OAR 268..284 CDD:281777 3/15 (20%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 272..285 3/14 (21%)
Nuclear localization signal. /evidence=ECO:0000255 278..282 0/3 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D454642at33208
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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