DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drgx and rx2

DIOPT Version :10

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_571301.2 Gene:rx2 / 30473 ZFINID:ZDB-GENE-990415-237 Length:327 Species:Danio rerio


Alignment Length:194 Identity:78/194 - (40%)
Similarity:96/194 - (49%) Gaps:33/194 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SYSYHPAIHDETFVRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVW 99
            |.|..|.|.||...::|.||||||||..||.|||.||.::|||||::||:||||:||.|.|||||
Zfish   118 SDSRSPDIPDEDQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVW 182

  Fly   100 FQNRRAKWRKAERLKDEQRKRENGESSSSLDKLHDSRESS---PDITGEIDDDMDDLPPRQRSHS 161
            |||||||||:       |.|.:.|..     |||||...|   |.:...:....:.||......|
Zfish   183 FQNRRAKWRR-------QEKMDTGTM-----KLHDSPIRSFNRPPMAPNVGPMSNSLPLDPWLSS 235

  Fly   162 PLANGQMEQQHSHSHSHSHSRSPGGGMHLDSSDNERPLSSNQLTATPHSASQSLGSISAGSPSP 225
            ||:        |.:..||.....|.|..|..:          .||.|...:.|.|.:....|.|
Zfish   236 PLS--------SATPMHSIPGFMGPGQSLQPT----------YTAHPGFLNTSPGMMQNMQPMP 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 42/55 (76%)
OAR 428..446 CDD:461067
rx2NP_571301.2 Octapeptide motif 37..44
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 48..73
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..139 9/20 (45%)
Homeodomain 136..192 CDD:459649 42/55 (76%)
OAR 302..316 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 304..317
Nuclear localization signal. /evidence=ECO:0000255 310..314
Blue background indicates that the domain is not in the aligned region.

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