DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drgx and rx1

DIOPT Version :10

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_571300.2 Gene:rx1 / 30472 ZFINID:ZDB-GENE-990415-236 Length:330 Species:Danio rerio


Alignment Length:466 Identity:114/466 - (24%)
Similarity:142/466 - (30%) Gaps:245/466 - (52%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PPRLPTLDYPFAATHPYTSYSYHPAIHDETFV------------------------------RRK 51
            |.:|.....|:....|....|..|..||....                              ::|
Zfish    72 PGKLDQRVQPYGHLPPLRDGSEQPTFHDADMFSNKCDGDLGDLRKAIESDSKSPDSADGEQPKKK 136

  Fly    52 QRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAERLKDE 116
            .||||||||..||.|||.||.::|||||::||:||||:||.|.||||||||||||||:.|::   
Zfish   137 HRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKI--- 198

  Fly   117 QRKRENGESSSSLDKLHDSRESSPDITGEIDDDMDDLPPRQRSHSPLANGQMEQQHSHSHSHSHS 181
                     .:|..||||                          ||:                  
Zfish   199 ---------DASTMKLHD--------------------------SPM------------------ 210

  Fly   182 RSPGGGMHLDSSDNERPLSSNQLTATPHSASQSLGSISAGSPSPSGMHREREHTPLVGGGGQGPS 246
                             ||.|:                     || ||      |.|        
Zfish   211 -----------------LSFNR---------------------PS-MH------PTV-------- 222

  Fly   247 SPSNSRNTDSPIEVGGPMSLTTGSRMAASSNNSASSTPTPTTPHAPQMPHSSAAAAAAFGSHIFG 311
                           |||            |||     .|..|..|. |.|||...     |...
Zfish   223 ---------------GPM------------NNS-----LPLDPWLPS-PLSSATPV-----HSIP 249

  Fly   312 NFGGGSNASDSNCGFRPVLSEQSAVAAAAAAAAAQRSANHPPLFLPPHLAAQFTHQPLFPGLKGV 376
            .|.|.:....:.......||                         ||...|| :.||:.|     
Zfish   250 GFMGPTQGLQTGYPGHSFLS-------------------------PPQPMAQ-SMQPMAP----- 283

  Fly   377 SPFQSLCSCCSLKPPPPPGSSVVAPLSIPVSSSSAASSPESPKSSGQGSVHDPRSNSVAELRRKA 441
            .|:|     |     |||.:.     ..|:...                  |.||:|:|.||.||
Zfish   284 PPYQ-----C-----PPPFTD-----KYPLEDV------------------DQRSSSIAALRMKA 315

  Fly   442 QEHSAALLQSL 452
            :||    :||:
Zfish   316 KEH----IQSM 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 42/55 (76%)
OAR 428..446 CDD:461067 11/17 (65%)
rx1NP_571300.2 Octapeptide motif 37..44
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 66..104 8/31 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 118..142 4/23 (17%)
Homeodomain 138..194 CDD:459649 42/55 (76%)
OAR 302..318 CDD:461067 9/15 (60%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 306..319 8/16 (50%)
Nuclear localization signal. /evidence=ECO:0000255 312..316 2/3 (67%)
Blue background indicates that the domain is not in the aligned region.

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