DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Drgx and hoxb6a

DIOPT Version :10

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_571194.1 Gene:hoxb6a / 30341 ZFINID:ZDB-GENE-990415-106 Length:228 Species:Danio rerio


Alignment Length:79 Identity:30/79 - (37%)
Similarity:44/79 - (55%) Gaps:14/79 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 RRNRTTFTLQQLEELETAFAQTHYPDVFTRE---DLAMKINLTEARVQVWFQNRRAKWRKAERL- 113
            ||.|.|:|..|..|||..|   |:....||.   ::|..:.|||.::::||||||.||:|..:| 
Zfish   151 RRGRQTYTRYQTLELEKEF---HFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKLI 212

  Fly   114 -------KDEQRKR 120
                   ::|:.||
Zfish   213 NCSQTSGEEEEEKR 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 25/58 (43%)
OAR 428..446 CDD:461067
hoxb6aNP_571194.1 Antp-type hexapeptide 132..137
Homeodomain 151..207 CDD:459649 25/58 (43%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.