DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drgx and hoxb2a

DIOPT Version :10

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_571191.1 Gene:hoxb2a / 30338 ZFINID:ZDB-GENE-990415-103 Length:390 Species:Danio rerio


Alignment Length:314 Identity:76/314 - (24%)
Similarity:108/314 - (34%) Gaps:96/314 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PPALHPCGPHP-----------------------PRLPTLDYPFAATHPYTSYSYHPA-IHDETF 47
            ||..|..||.|                       |:........||:....|..|..| :...|.
Zfish    83 PPTQHQQGPAPLSGGAPLAHEFPWMKEKKSSKKCPKPGATAAAAAASPSQASSGYTTAGLESPTE 147

  Fly    48 VR------RKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAK 106
            ::      ...||.||.:|..||.|||..|....|.....|.::|..::|||.:|:|||||||.|
Zfish   148 IQGGLDNVSGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMK 212

  Fly   107 WRKAERLKDEQRKRENGESSSSLDKLHDSRESSPDITGEIDDDMDDLPPRQRSHSPLANGQMEQQ 171
            .:   |.....|..:.|| .|..|.|..:..|                      ||.::..:|..
Zfish   213 HK---RQTTHHRDGQEGE-PSGFDLLEGTDAS----------------------SPYSSQSLEVS 251

  Fly   172 HSHSHSHSHSRS-PGGGMHLDSSDNERPLSSNQLTATPHSASQSLGSISAGSPSPSGMHREREHT 235
            .|.|.:.|.|.: |....:.:|||..:|        ||...       .|..|.|:.:.....|:
Zfish   252 GSGSAAPSESETCPTTAAYTNSSDKSQP--------TPEEG-------QASQPEPASVPDTAVHS 301

  Fly   236 P------------LVGGGGQGP-----------SSPS-NSRNTDSPIEVGGPMS 265
            |            :..|...||           |.|. |..:|||.:::...:|
Zfish   302 PPYPTPTADNPTTMAEGRAAGPEHSFTEPQDATSLPDLNFFSTDSCLQISDALS 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 26/55 (47%)
OAR 428..446 CDD:461067
hoxb2aNP_571191.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..73
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..100 6/16 (38%)
Antp-type hexapeptide 103..108 0/4 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..155 7/46 (15%)
Homeodomain 159..215 CDD:459649 26/58 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 211..338 32/167 (19%)
PRK11907 237..>320 CDD:237019 21/119 (18%)
Blue background indicates that the domain is not in the aligned region.

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