DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drgx and Alx4

DIOPT Version :10

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001100023.1 Gene:Alx4 / 296511 RGDID:1310201 Length:399 Species:Rattus norvegicus


Alignment Length:409 Identity:98/409 - (23%)
Similarity:130/409 - (31%) Gaps:211/409 - (51%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 DETFVRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWR 108
            |....:.|:||||||||..||||||..|.:||||||:.||.|||:.:||||||||||||||||||
  Rat   194 DSESSKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 258

  Fly   109 KAERLKDEQRKRENGESSSSLDKLHDSRESSPDITGEIDDDMDDLPPRQRSHSPLANGQMEQQHS 173
            |.||.                                                    |||:|..:
  Rat   259 KRERF----------------------------------------------------GQMQQVRT 271

  Fly   174 HSHSHSHSRSPGGGMHLDSSDNERPLSSNQLTATPHSAS----QSLGSISAGSPSPSGMHREREH 234
            |.                |:..|.||    ||...:.|.    ..:|:..|.||.|:.:      
  Rat   272 HF----------------STAYELPL----LTRAENYAQIQNPSWIGNNGAASPVPACV------ 310

  Fly   235 TPLVGGGGQGPSSPSNSRNTDSPIEVGGPMSLTTGSRMAASSNNSASSTPTPTTPHAPQMPHSSA 299
                     .|..|                                  .|...:||| ..|.|.|
  Rat   311 ---------VPCDP----------------------------------VPACMSPHA-HPPGSGA 331

  Fly   300 AAAAAFGSHIFGNFGGGSNASDSNCGFRPVLSEQSAVAAAAAAAAAQRSANHPPLFLPPHLAAQF 364
            ::.:.|    ....|.||:...:                                    |:.:.|
  Rat   332 SSVSDF----LSVSGAGSHVGQT------------------------------------HMGSLF 356

  Fly   365 THQPLFPGLKGVSPFQSLCSCCSLKPPPPPGSSVVAPLSIPVSSSSAASSPESPKSSGQGSVHDP 429
            ....:.|||.|.                                          :.:|:   .|.
  Rat   357 GAAGISPGLNGY------------------------------------------EMNGE---PDR 376

  Fly   430 RSNSVAELRRKAQEHSAAL 448
            :::|:|.||.||:|||||:
  Rat   377 KTSSIAALRMKAKEHSAAI 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 43/55 (78%)
OAR 428..446 CDD:461067 9/17 (53%)
Alx4NP_001100023.1 Homeodomain 203..259 CDD:459649 43/55 (78%)
OAR 375..393 CDD:461067 9/17 (53%)

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