DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Drgx and Dbx1

DIOPT Version :10

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001009644.1 Gene:Dbx1 / 292934 RGDID:1308896 Length:335 Species:Rattus norvegicus


Alignment Length:221 Identity:63/221 - (28%)
Similarity:95/221 - (42%) Gaps:48/221 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PPRLPTLDYPF--AATHPYTSYSYHPAIHD-----ETF-----VRRKQRR---NRTTFTLQQLEE 66
            ||:  |..:|:  .:..|:...||.||...     .||     .|.|.||   .|..|:..|.:.
  Rat   133 PPK--TFAFPYFEGSFQPFIRSSYFPASSSVVPIPGTFSWPLAARGKPRRGMLRRAVFSDVQRKA 195

  Fly    67 LETAFAQTHY---PDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAERLKDEQRKRENGESSSS 128
            ||..|.:..|   ||   |:.||.|:.|.:::|::||||||.|||.:   |:.:.....|....:
  Rat   196 LEKTFQKQKYISKPD---RKKLASKLGLKDSQVKIWFQNRRMKWRNS---KERELLSSGGCREQT 254

  Fly   129 L-DKLHDSRESSPDIT-----GEIDDDMDDLPPRQRSHSP-----LANGQMEQQHSHSHSHSHSR 182
            | .||:    ..||::     |..|::.|........|:|     |..|.:..      |.:||.
  Rat   255 LPTKLN----PHPDLSDVGQKGPGDEEEDSPGASLAYHAPPDPRHLLEGPLPA------SPAHSS 309

  Fly   183 SPGGGMHL-DSSDNERPLSSNQLTAT 207
            |||..... ||.::|......::|.:
  Rat   310 SPGKPSDFSDSDEDEEGEEDEEITVS 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 25/61 (41%)
OAR 428..446 CDD:461067
Dbx1NP_001009644.1 PRK12323 <49..182 CDD:481241 15/50 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 56..102
Homeodomain 184..238 CDD:459649 23/56 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..335 24/104 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.