DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drgx and Shox2

DIOPT Version :10

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_038693.1 Gene:Shox2 / 20429 MGIID:1201673 Length:331 Species:Mus musculus


Alignment Length:222 Identity:70/222 - (31%)
Similarity:107/222 - (48%) Gaps:45/222 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 IHDETFVRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAK 106
            :.||...:.||||:||.|||:||.|||..|.:|||||.|.||:|:.::.|:||||||||||||||
Mouse   130 MEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAK 194

  Fly   107 WRKAERLKDEQRKRENGESSSSLDKLHD-------SRESSPDITGEIDDDMDDLPPRQRSH---S 161
            .||.|                  ::||.       |:..:..:...::.....:|.:|.||   :
Mouse   195 CRKQE------------------NQLHKGVLIGAASQFEACRVAPYVNVGALRMPFQQDSHCNVT 241

  Fly   162 PLANGQMEQQ--------HSHSHSHSHSRSPGGGMHLDSSDNERPLSSNQLTATPHSASQSLGSI 218
            || :.|::.|        |:|.|.|.|..:....|...:.....||::  |.|...||:..:.:.
Mouse   242 PL-SFQVQAQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLAT--LAADSASAASVVAAA 303

  Fly   219 SAGSPSPSGMH------REREHTPLVG 239
            :|...:.....      :.::|...:|
Mouse   304 AAAKTTSKNSSIADLRLKAKKHAAALG 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 37/55 (67%)
OAR 428..446 CDD:461067
Shox2NP_038693.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 26..140 2/9 (22%)
Homeodomain 141..197 CDD:459649 37/55 (67%)
OAR 311..327 CDD:461067 1/15 (7%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 313..326 0/12 (0%)
Blue background indicates that the domain is not in the aligned region.

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