DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drgx and unc-42

DIOPT Version :10

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001263845.1 Gene:unc-42 / 192081 WormBaseID:WBGene00006778 Length:279 Species:Caenorhabditis elegans


Alignment Length:241 Identity:70/241 - (29%)
Similarity:101/241 - (41%) Gaps:84/241 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PPRLPTLDYPFAATHPYTSYSYHPAIHDETFVRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFT 81
            |.||.:|:.|                  |:.....:||:|||||.:||:||:.||.::||||::.
 Worm    83 PARLCSLERP------------------ESERLNSRRRHRTTFTQEQLQELDAAFQKSHYPDIYV 129

  Fly    82 REDLAMKINLTEARVQVWFQNRRAKWRKAERLKDEQRKRENGESSSSLDKLHDSRESSPDITGEI 146
            ||:||....|.|||:||||||||||.||.|:               .|:|..:            
 Worm   130 REELARITKLNEARIQVWFQNRRAKHRKHEK---------------QLNKAIN------------ 167

  Fly   147 DDDMDDLPPRQRSHSPLANGQMEQ------------------------QHSHSHSHSHSRSPGGG 187
                   ||.....:| ||..|.|                        ..|.|:|:|.:......
 Worm   168 -------PPHSFLSNP-ANTLMRQGMYPAALNRDGFWYQSYQRPMPYPTASPSYSNSFTNPIANF 224

  Fly   188 MHLDSS---DNE--RPLSSNQLTATPH--SASQSLGSISAGSPSPS 226
            .|..:|   |:|  :...:.::|.||.  :|:.||.:|:.....||
 Worm   225 GHSITSFQADDEFYQKSLALRMTTTPSAATAATSLANINYQQTQPS 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 35/55 (64%)
OAR 428..446 CDD:461067
unc-42NP_001263845.1 Homeodomain 101..157 CDD:459649 35/55 (64%)
Blue background indicates that the domain is not in the aligned region.

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