DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drgx and Hoxd3

DIOPT Version :10

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_034598.2 Gene:Hoxd3 / 15434 MGIID:96207 Length:433 Species:Mus musculus


Alignment Length:429 Identity:100/429 - (23%)
Similarity:139/429 - (32%) Gaps:174/429 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PPALH----PCGPHPPRLPTLDYPFAATHP------------YTSYSYHPAIHDETFVRRKQ--- 52
            ||.|:    |..|.||..|||. |.:.|:|            .::.|....|..:.|...|:   
Mouse   107 PPGLNSEQQPPQPPPPPPPTLP-PSSPTNPGSGVPAKKTKGGLSASSSSSTISKQIFPWMKESRQ 170

  Fly    53 -------------------------RRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLT 92
                                     :|.||.:|..||.|||..|....|.....|.::|..:|||
Mouse   171 NSKQKNSCATSGENCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLT 235

  Fly    93 EARVQVWFQNRRAKWRKAERLKDEQRKRENGESSSSLDKLHDSRESSPDITGEIDDDMDDLPPRQ 157
            |.::::||||||.|::|.::.|                             |.:           
Mouse   236 ERQIKIWFQNRRMKYKKDQKAK-----------------------------GIL----------- 260

  Fly   158 RSHSPLANGQMEQQHSHSHSHSHSRSPGGGMHLDSSDNERPLSSNQLTATPHSASQSLGSISAGS 222
              |||.  ||           |..|||             ||..                 :||.
Mouse   261 --HSPA--GQ-----------SPERSP-------------PLGG-----------------AAGH 280

  Fly   223 PSPSGMHREREHTPLVGGGGQGPSSPSNSRNTDSPIEVGGPMSLTTGSRMAASSNNSASSTPTPT 287
            .:.||     :..|:.|.....||.|:.:::  .|...|          :||.:...:|..|...
Mouse   281 VAYSG-----QLPPVPGLAYDAPSPPAFAKS--QPNMYG----------LAAYTAPLSSCLPQQK 328

  Fly   288 TPHAPQM-PHSSAAAAAAFGSHIFGNFGG-----GSNASDS---------NCGFRPVLSEQSAVA 337
            ...||:. ||..|:....|.|   .|..|     |.|..||         |.|.   ||..|: |
Mouse   329 RYPAPEFEPHPMASNGGGFAS---ANLQGSPVYVGGNFVDSMAPTSGPVFNLGH---LSHPSS-A 386

  Fly   338 AAAAAAAAQRSANHPPLFLPPH-----LAAQFTHQPLFP 371
            :...:.|||...||......||     |:|..:.|...|
Mouse   387 SVDYSCAAQIPGNHHHGPCDPHPTYTDLSAHHSSQGRLP 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 24/55 (44%)
OAR 428..446 CDD:461067
Hoxd3NP_034598.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 44..198 17/91 (19%)
Antp-type hexapeptide 161..166 1/4 (25%)
Homeodomain 196..252 CDD:459649 24/55 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 258..280 13/77 (17%)
DUF4074 370..431 CDD:463833 17/60 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 401..433 6/25 (24%)
Blue background indicates that the domain is not in the aligned region.

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