DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drgx and Hoxa6

DIOPT Version :10

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_034584.1 Gene:Hoxa6 / 15403 MGIID:96178 Length:232 Species:Mus musculus


Alignment Length:149 Identity:43/149 - (28%)
Similarity:61/149 - (40%) Gaps:41/149 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PCGPHPPRLPTLDYPFAATHPYTSYSYHP-------AIHDETFVRR------------------- 50
            |.|.:..|.|. ||    .|......|.|       |:|:|...|:                   
Mouse    90 PSGNNKQRGPG-DY----LHFSPEQQYKPDGSVQGKALHEEGTDRKYTSPVYPWMQRMNSCAGAV 149

  Fly    51 ---KQRRNRTTFTLQQLEELETAFAQTHYPDVFTRE---DLAMKINLTEARVQVWFQNRRAKWRK 109
               ..||.|.|:|..|..|||..|   |:....||.   ::|..:.|||.::::||||||.||:|
Mouse   150 YGSHGRRGRQTYTRYQTLELEKEF---HFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 211

  Fly   110 AERL-KDEQRKRENGESSS 127
            ..:| ...|...|:.|:.:
Mouse   212 ENKLINSTQASGEDSEAKA 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 25/58 (43%)
OAR 428..446 CDD:461067
Hoxa6NP_034584.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 88..126 11/40 (28%)
Antp-type hexapeptide 135..140 0/4 (0%)
Homeodomain 155..211 CDD:459649 25/58 (43%)
Blue background indicates that the domain is not in the aligned region.

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