DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drgx and alx4

DIOPT Version :10

Sequence 1:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster
Sequence 2:XP_004913406.1 Gene:alx4 / 100493396 XenbaseID:XB-GENE-853003 Length:376 Species:Xenopus tropicalis


Alignment Length:238 Identity:86/238 - (36%)
Similarity:109/238 - (45%) Gaps:44/238 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 KQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAERLKD 115
            |:||||||||..||||||..|.:||||||:.||.|||:.:|||||||||||||||||||.||...
 Frog   180 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQ 244

  Fly   116 EQRKRENGESSSSLDKLHDSRESSPDITGEIDDDMDDLPPRQRSHSPLANGQMEQQHSHSHSHSH 180
            .|:.|.:..|:..|          |.:|            |..:::.:.|            .|.
 Frog   245 MQQVRTHFSSAYEL----------PLLT------------RAENYAQIQN------------PSW 275

  Fly   181 SRSPGGGMHLDSSDNERPLSSNQLTATPHSASQSLGSIS--AGSPSPSGMHREREHT-PLVGGGG 242
            ..:.|||..:.:.  ..|..:.....:|||...|.|.:|  ...|.| |.|..:.|. .|.|...
 Frog   276 IGNNGGGSPVPAC--VVPCDTVSSCMSPHSHPHSAGGVSEFLSVPGP-GAHVGQTHMGGLFGSAA 337

  Fly   243 QGPSSPSNSRNTDSPIEVGGPMSLTTGSRMAASSNNSASSTPT 285
            .||.......||    |.....|.....||.|..:::|.|..|
 Frog   338 MGPGINGYDLNT----EPDRKSSSIAALRMKAKEHSAAMSWAT 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 43/55 (78%)
OAR 428..446 CDD:461067
alx4XP_004913406.1 COG5576 120..266 CDD:227863 55/107 (51%)
Homeodomain 182..238 CDD:459649 43/55 (78%)
OAR 352..370 CDD:461067 4/17 (24%)
Blue background indicates that the domain is not in the aligned region.

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