DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34342 and CER4

DIOPT Version :9

Sequence 1:NP_001097509.3 Gene:CG34342 / 5740152 FlyBaseID:FBgn0085371 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_567936.5 Gene:CER4 / 829521 AraportID:AT4G33790 Length:493 Species:Arabidopsis thaliana


Alignment Length:505 Identity:121/505 - (23%)
Similarity:223/505 - (44%) Gaps:77/505 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 VTDFYSNATVLITGGTGFVGKVLTEKLLR-SFGLRKIYMLIRSKDNMSVQERLKGFFNESI---- 129
            |..:..|.::|:.|..||:..:..||:|| :..::|:|:|:|:....|..:|    ||:.|    
plant    10 VLKYLDNKSILVVGAAGFLANIFVEKILRVAPNVKKLYLLLRASKGKSATQR----FNDEILKKD 70

  Fly   130 -FNRMREE-SPQL----LAKVHPIRADYSAIDLDIDSADRA-MLSSEVQIVFNVVASVKFNEKLS 187
             |..::|: .|.|    ..|:..:..|....||.:...|.| .:..:|..:.|:.|:.||:|:..
plant    71 LFKVLKEKYGPNLNQLTSEKITIVDGDICLEDLGLQDFDLAHEMIHQVDAIVNLAATTKFDERYD 135

  Fly   188 DAIDINVLGTKKILDLVMEMKHLKSFVHISTLYCNCNRK--FIKEQVYEN----------EIGYE 240
            .|:.||.||...:|:.......:|..||:||.|. |..|  .|.|..|..          :|.||
plant   136 VALGINTLGALNVLNFAKRCAKVKILVHVSTAYV-CGEKSGLIMETPYRMGETLNGTTGLDINYE 199

  Fly   241 KIMQIYRTFDD------------ETLEK--MRHCLIGQMPNTYTMTKKCAENLVNHRAFHMPAGI 291
            |.: :....|.            ||::.  :|...:...||||..||...|.:|..:..::...:
plant   200 KKL-VQEKLDQLRVIGAAPETITETMKDLGLRRAKMYGWPNTYVFTKAMGEMMVGTKRENLSLVL 263

  Fly   292 FRPPIVMSTYKDPFPGWTDNLYGPSGLCTWSARGLVRCIYGKASCKANMVPADYVVNAMIATAWD 356
            .||.|:.||:|:||||||:.:.....|.....:|.:.|........::::|||.|||:::.:.  
plant   264 LRPSIITSTFKEPFPGWTEGIRTIDSLAVGYGKGKLTCFLCDLDAVSDVMPADMVVNSILVSM-- 326

  Fly   357 IARRFKLRESKVDGKSELPVYNYVSDANNITWGQ------YMHLSRKGFHEPFDKALWCFSYVII 415
                     :...||.|..:|:..|...|.....      |.:.|.|.:.....|.:...:..|:
plant   327 ---------AAQAGKQEEIIYHVGSSLRNPMKNSKFPELAYRYFSIKPWTNKEGKVVKVGAIEIL 382

  Fly   416 PS-KPLH--CAIAFFLHNIPAYILDLIAMVTGQK--RIYAKAYGKISRIIDM----MAWFGLKEW 471
            .| :..|  ..|.:.:......::::|.....:|  :.:.|....|.|::|:    :.::|:   
plant   383 SSMRSFHRYMTIRYLIALKGLELVNIILCKLFEKEFQYFNKKINFIFRLVDLYQPYLFFYGI--- 444

  Fly   472 KFAHRNIDELNELLPRE--ERSVLQFNIATINWSEYF-RSYLSGIRRYFF 518
             |...|.::|.:::.:.  |..:..|:...::|.:|| .:::.|:.:|.|
plant   445 -FDDSNTEKLRKMVSKTGVENEMFYFDPKVLDWDDYFLNTHVIGLLKYVF 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34342NP_001097509.3 PLN02996 70..519 CDD:215538 121/505 (24%)
FAR-N_SDR_e 78..397 CDD:187547 95/362 (26%)
Sterile 429..519 CDD:281068 18/99 (18%)
CER4NP_567936.5 PLN02996 6..493 CDD:215538 120/503 (24%)
FAR-N_SDR_e 17..365 CDD:187547 95/364 (26%)
Sterile 396..493 CDD:281068 17/100 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D815047at2759
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X145
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1010.070

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