DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34342 and CG30427

DIOPT Version :10

Sequence 1:NP_001097509.3 Gene:CG34342 / 5740152 FlyBaseID:FBgn0085371 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_726498.1 Gene:CG30427 / 37986 FlyBaseID:FBgn0043792 Length:506 Species:Drosophila melanogaster


Alignment Length:513 Identity:158/513 - (30%)
Similarity:273/513 - (53%) Gaps:21/513 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 VSATPVTDFYSNATVLITGGTGFVGKVLTEKLLRS-FGLRKIYMLIRSKDNMSVQERLKGFFNES 128
            |..:||.::|.:.|:.|||.:||:||||.||||.| ..|:::.::.|.|...:.:.||:..|...
  Fly     3 VDLSPVQEYYKDKTIFITGASGFMGKVLLEKLLYSCHSLKEVIIICRPKRGKAPETRLEEMFKLP 67

  Fly   129 IFNRMREESPQLLAKVHPIRADYSAIDLDIDSADRAMLSSEVQIVFNVVASVKFNEKLSDAIDIN 193
            ||.|:::|.|::|.:|...:.|.:...|.:.......::....|||::.|::|....|.||||:|
  Fly    68 IFQRIKDERPEMLKRVTIYQGDVTFDQLGLSGESLKHVTENTNIVFHMAATLKLEGNLRDAIDMN 132

  Fly   194 VLGTKKILDLVMEMKHLKSFVHISTLYCNCNRKFIKEQVYENEIGYEKIMQIYRTFDDETLEKMR 258
            :|||::.|::..|||.|::|:|:||.:|||::..:.|:|||.....|.:|::....|.:||:.:.
  Fly   133 LLGTRRALNVAKEMKQLEAFIHLSTAFCNCDQDVMYEKVYEFPHKPEDLMRLAEWMDVKTLDAIT 197

  Fly   259 HCLIGQMPNTYTMTKKCAENLVNHRAFHMPAGIFRPPIVMSTYKDPFPGWTDNLYGPSGLCTWSA 323
            ..|:...|||||.:|:.||.||......||..|.||.||.....:|.|||.||:.||:|:...:.
  Fly   198 PDLLKPHPNTYTYSKRLAELLVRDHYESMPVIIARPSIVTPAVAEPLPGWVDNMNGPTGVLIGAG 262

  Fly   324 RGLVRCIYGKASCKANMVPADYVVNAMIATAW--DIARRFKLRESKVDGKSELPVYNY-VSDANN 385
            :|::|.:......|:.::|.|..:|.:|...:  .:|.:..|         ::||||. |.||..
  Fly   263 KGVIRSMICNGELKSEVIPVDIAINGLILLPYHNSLAEKRPL---------QIPVYNLTVDDAKK 318

  Fly   386 ITWGQYMHLSRK-GFHEPFDKALWCFSYVIIPSKPLH--CAIAFFLHNIPAYILDLIAMVTGQKR 447
            .||...|.:.|. |...||:..||.....:..||..|  |.|.|..  :|||::|.:.::.||:|
  Fly   319 RTWKWIMDVGRDLGIKYPFEVGLWYPDGNMTSSKFYHTICTILFMW--LPAYLIDFLLLIFGQRR 381

  Fly   448 IYAKAYGKISRIIDMMAWFGLKEWKFAHRNIDELNELLPREERSVLQFNIATINWSEYFRSYLSG 512
            ...:...||:..::::.:|..:.|.|...:.:::.:.|...:|.:.:.|...::..||.:..:.|
  Fly   382 FMIRVQTKIAVGLEVLQFFTTRSWDFKSTHFEQIYKELGSTDRRIFKINTDDVDDYEYMKVSILG 446

  Fly   513 IRRYFFKDSANDNKLQQRRTIYRRMLILHTLLKTTFGLSLIMCMLRVYLRIFKIMPKI 570
            .|:|..|:..  ..|.:.|...|.|.:|..:.||.. :|.::..:...||:..:...:
  Fly   447 GRQYVMKEPL--TSLPKSRIQLRFMYVLDRICKTMI-ISGLLYWVSQKLRVVDLFRSV 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34342NP_001097509.3 FAR-N_SDR_e 78..397 CDD:187547 111/322 (34%)
Sterile 428..519 CDD:460779 20/90 (22%)
CG30427NP_726498.1 FAR-N_SDR_e 15..321 CDD:187547 108/314 (34%)
Sterile 362..453 CDD:460779 21/92 (23%)

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