DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34342 and Sgp

DIOPT Version :9

Sequence 1:NP_001097509.3 Gene:CG34342 / 5740152 FlyBaseID:FBgn0085371 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_001260257.1 Gene:Sgp / 34188 FlyBaseID:FBgn0032055 Length:523 Species:Drosophila melanogaster


Alignment Length:501 Identity:169/501 - (33%)
Similarity:282/501 - (56%) Gaps:27/501 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 TPVTDFYSNATVLITGGTGFVGKVLTEKLLRSFGLRKIYMLIRSKDNMSVQERLKGFFNESIFNR 132
            |.:..||.:.:|.:||||||:|||:.||||||..:|::|:|:|.|.|.:|:.|.:.:.:|.:|..
  Fly     3 TDILQFYKDKSVFVTGGTGFLGKVIIEKLLRSTDVRRVYLLVRPKKNETVEGRFQAWKDEPVFKI 67

  Fly   133 MREESPQLLAKVHPIRADYSAIDLDIDSADRAMLSSEVQIVFNVVASVKFNEKLSDAIDINVLGT 197
            :.:..|:.|..|.||..|.|...|.:...||.|::::||::.:..||::|.|.|..|::||...|
  Fly    68 LLKAKPEALKLVTPISGDCSEPGLGLSDGDRRMVTADVQVIIHSAASIRFVEPLQRALNINTRAT 132

  Fly   198 KKILDLVMEMKHLKSFVHISTLYCNCNRKFIKEQVYENEI--GYEKIMQIYRTFDDETLEKMRHC 260
            :.::.|..|||.|::||||||.:.||..:.|:|:.|...:  ...|:::...|...:.|:||...
  Fly   133 RLMIQLAKEMKGLEAFVHISTAFSNCPSQHIEERFYPEHLTCPAAKVLEFNETLSPDLLDKMAPA 197

  Fly   261 LIGQMPNTYTMTKKCAENLVNHRAFHMPAGIFRPPIVMSTYKDPFPGWTDNLYGPSGLCTWSARG 325
            |:|:.|||||.||..||.::......:|..:|||.|:::.:|:|..||.|||:|...|...:..|
  Fly   198 LMGKFPNTYTYTKALAEQVIQMEGQDLPICVFRPAIILANFKEPMSGWIDNLHGVVALIYGNTYG 262

  Fly   326 LVRCIYGKASCKANMVPADYVVNAMIATAWDIARRFKLR-ESKVDGKSELPVYNY-VSDANNITW 388
            ::|.:|......|.:||.||..|..:|:.|.:|:..:.| .|::..|...|:|.. .:.:|:||:
  Fly   263 ILRLLYVNPKADAIIVPGDYCANVALASGWQVAKNSESRSSSQLAAKKPPPIYTLATTKSNSITF 327

  Fly   389 GQYMHLSRKGFHE----PFDKALWCFSYVIIPSKP----LHCAIAFFLHNIPAYILDLIAMVTGQ 445
            |:.:.|   |.|.    |..|.:| :.:....:.|    |.|   .|.|.||.:..||:..:.|:
  Fly   328 GKAVKL---GIHHNHTIPVTKTIW-YPFAHFTTCPWLFKLGC---IFYHLIPGFFFDLLLRIQGK 385

  Fly   446 KRIYAKAYGKISRIIDMMAWFGLKEWKFAHRNIDELNELLPREERSVLQFNIATINWSEYFRSYL 510
            |.|..::|.||..::.::..|..|.::....|.::|.:.:..|:||:..|::||:||.|||...|
  Fly   386 KPILMRSYQKIHEVLLLLFPFNGKTYEMDMNNTNQLWDSMSPEDRSIFPFDMATLNWEEYFTRIL 450

  Fly   511 SGIRRYFFKDSANDNKLQQRRTIYRRMLILHTLLKTTFGLSLIMCM 556
            ||:|.:.:|:|.  :.|:|.:....|..|||.      .|.|::|:
  Fly   451 SGMRVFLYKESW--DTLEQAKKRLFRFYILHR------SLQLVLCL 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34342NP_001097509.3 PLN02996 70..519 CDD:215538 157/460 (34%)
FAR-N_SDR_e 78..397 CDD:187547 116/322 (36%)
Sterile 429..519 CDD:281068 30/89 (34%)
SgpNP_001260257.1 PLN02996 1..449 CDD:215538 154/452 (34%)
FAR-N_SDR_e 12..333 CDD:187547 115/320 (36%)
FAR_C 367..457 CDD:176924 31/89 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466723
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
99.000

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