DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34342 and Far2

DIOPT Version :9

Sequence 1:NP_001097509.3 Gene:CG34342 / 5740152 FlyBaseID:FBgn0085371 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_001334445.1 Gene:Far2 / 330450 MGIID:2687035 Length:515 Species:Mus musculus


Alignment Length:506 Identity:170/506 - (33%)
Similarity:258/506 - (50%) Gaps:42/506 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 VTDFYSNATVLITGGTGFVGKVLTEKLLR-SFGLRKIYMLIRSKDNMSVQERLKGFFNESIFNRM 133
            :..||||.::||||.|||:||||.|||.| |..|:.||:|:|.|...::|||:....|..:|.::
Mouse     4 IAAFYSNKSILITGATGFLGKVLMEKLFRTSPHLKVIYILVRPKSGQTLQERVFQILNSKLFEKV 68

  Fly   134 REESPQLLAKVHPIRADYSAIDLDIDSADRAMLSSEVQIVFNVVASVKFNEKLSDAIDINVLGTK 198
            :|..|.:..|:.||.||.:..|..|...|...|.|...|:|:..|:|:|:..|.:|:.:||..|:
Mouse    69 KEVCPNVHEKIRPISADLNQRDFAISKEDVQELLSCTNIIFHCAATVRFDAHLREAVQLNVTATQ 133

  Fly   199 KILDLVMEMKHLKSFVHISTLYCNCNRKFIKEQVYENEIGYEKIMQIYRTFDDETLEKMRHCLIG 263
            ::|.:..:|..|::|:||||.:.|||...|.|.:|...:...||:......||..:|::...|||
Mouse   134 QLLLMASQMPKLEAFIHISTAFSNCNLSHIDEVIYPCPVEPRKIIDSMEWLDDSIIEEITPKLIG 198

  Fly   264 QMPNTYTMTKKCAENLVNHRAFHMPAGIFRPPIVMSTYKDPFPGWTDNLYGPSGLCTWSARGLVR 328
            ..|||||.||...|.:|...:.::...|.||.||.:|:::|||||.|||.|||||...:.:|.:|
Mouse   199 DRPNTYTYTKALGEIVVQQESGNLNVAIVRPSIVGATWQEPFPGWVDNLNGPSGLIIATGKGFLR 263

  Fly   329 CIYGKASCKANMVPADYVVNAMIATAWDIARRFKLRESKVDGKSELPVYNYVSDANNITWGQYMH 393
            .|.......|:::|.|.|||..||..|..|..        ..||.|..::...:.|...|.: |.
Mouse   264 SIKATPMAVADVIPVDTVVNLTIAVGWYTAVH--------RPKSTLIYHSTSGNLNPCNWYK-MG 319

  Fly   394 LS----------RKGFHEP---FDKALWCFSYVIIPSKPLHCAIAFFLHNIPAYILDLIAMVTGQ 445
            |.          ...|..|   |..:.:...|....|           |.:||.|.|....:||:
Mouse   320 LQVLATIEKIPFESAFRRPNADFTTSNFTTHYWNTVS-----------HRVPAIIYDFYLRLTGR 373

  Fly   446 KRIYAKAYGKISRIIDMMAWFGLKEWKFAHRNIDE-LNELLPREERSVLQFNIATINWSEYFRSY 509
            |....|...::.:.|.|:.:|....|:::..|.:. |:||.|.::| |..|::..:||.||..:|
Mouse   374 KPRMLKLMNRLLKTISMLEYFINHSWEWSTNNTEMLLSELSPEDQR-VFNFDVRQLNWLEYIENY 437

  Fly   510 LSGIRRYFFK-DSANDNKLQQRRTIYRRMLILHTLLKTTFGLSLIMCMLRV 559
            :.|:::|..| |.|...|.:|.   .||:..:|.|..|  .|.||:..|.:
Mouse   438 VLGVKKYLLKEDLAGIPKAKQH---LRRLRNIHYLFNT--ALFLIIWRLLI 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34342NP_001097509.3 PLN02996 70..519 CDD:215538 156/463 (34%)
FAR-N_SDR_e 78..397 CDD:187547 119/329 (36%)
Sterile 429..519 CDD:281068 28/90 (31%)
Far2NP_001334445.1 FAR-N_SDR_e 11..315 CDD:187547 116/311 (37%)
Sterile 357..447 CDD:397244 28/90 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847927
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

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