DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34342 and SPOM_SPCC162.02C

DIOPT Version :10

Sequence 1:NP_001097509.3 Gene:CG34342 / 5740152 FlyBaseID:FBgn0085371 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_588242.1 Gene:SPOM_SPCC162.02C / 2538929 PomBaseID:SPCC162.02C Length:981 Species:Schizosaccharomyces pombe


Alignment Length:202 Identity:52/202 - (25%)
Similarity:85/202 - (42%) Gaps:39/202 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SSRRSSNGCAS-----GHDVEEEEEEQLFQEASSGTRTNSVDGIAAPFTAAVSATPVTDFYSNAT 78
            :|..:.|..||     .::|.....|.|.::|.:.:||          ...:|..|....|    
pombe   596 NSNCTPNSIASIIQKKSYNVSSITYELLNEDACALSRT----------IPKLSILPTNGQY---- 646

  Fly    79 VLITGGTGFVGKVLTEKLLRSFGLR-KIYMLIRSKDNMSVQERLKGFFNESIFNRMREESPQLL- 141
            .|:||.||:.|:...|.|::   |. .:..|:|...:.:.:|||     .|:...:|..|..:: 
pombe   647 FLLTGATGYFGRRFLEYLVK---LNISVVCLVRESSDEAAKERL-----ISLVPSLRISSENIIV 703

  Fly   142 --AKVHPIRADYSAIDLDIDSADRAMLSSEVQIVFNVVASVKFNEKLSDAIDINVLGTKKILDL- 203
              |.|..||       ..:|.|....|...|..::::.|.|.:.:...:....||||||.:|:| 
pombe   704 WAAHVEEIR-------FGLDDAKWEFLVENVSRIYHMAAEVHWMKSYQELRPANVLGTKTVLELS 761

  Fly   204 VMEMKHL 210
            ||..|.|
pombe   762 VMGPKAL 768

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34342NP_001097509.3 FAR-N_SDR_e 78..397 CDD:187547 39/138 (28%)
Sterile 428..519 CDD:460779
SPOM_SPCC162.02CNP_588242.1 MenE/FadK 22..514 CDD:440087
Thioester-redct 648..979 CDD:273787 39/136 (29%)
Blue background indicates that the domain is not in the aligned region.

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