DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34342 and fard-1

DIOPT Version :9

Sequence 1:NP_001097509.3 Gene:CG34342 / 5740152 FlyBaseID:FBgn0085371 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_001370741.1 Gene:fard-1 / 180582 WormBaseID:WBGene00022200 Length:536 Species:Caenorhabditis elegans


Alignment Length:521 Identity:172/521 - (33%)
Similarity:288/521 - (55%) Gaps:45/521 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 ATPVTDFYSNATVLITGGTGFVGKVLTEKLLRSF-GLRKIYMLIRSKDNMSVQERLKGFFNESIF 130
            |..|.|.|:.::||:||||||:|||:.||||.:. .::.||::||::...:.||||.|..::.:|
 Worm     2 AFSVRDVYAGSSVLLTGGTGFLGKVIVEKLLWTIDDIQNIYLMIRTRKGKNPQERLSGLLHDPLF 66

  Fly   131 NRMREESPQLLAKVHPIRADYSAIDLDIDSADRAMLSSEVQIVFNVVASVKFNEKLSDAIDINVL 195
            ||:|:|.|:...|:..|..|....:|.:|..|..::...|.:|.:..|:|||:|.|..|:.:||:
 Worm    67 NRIRQEKPEAFDKLKAIGGDMMVENLGMDPEDVMLIRDNVNVVIHSAATVKFDEHLRAAVTMNVI 131

  Fly   196 GTKKILDLVMEMKHLKSFVHISTLYCNCNRKFIKEQVYENEIGYEKIMQIYRTFDDETLEKMRHC 260
            |||:|:||..::|.||..||:||.|.||:|....|::|::.:..:|::......|||||.|:...
 Worm   132 GTKRIIDLCHQIKDLKVLVHVSTAYANCDRFETTEKIYKSPMAPQKLVDALSWMDDETLTKITPK 196

  Fly   261 LIGQMPNTYTMTKKCAENLVNHRAFHMPAGIFRPPIVMSTYKDPFPGWTDNLYGPSGLCTWSARG 325
            ::|..|||||:||..||:.:...|..:|..|.||.||.:.::.|.||||||:.||:|:.....||
 Worm   197 ILGLRPNTYTLTKALAESTIETEAKDIPVIIIRPSIVGAMWQGPLPGWTDNINGPTGIFAAVGRG 261

  Fly   326 LVRCIYGKASCKANMVPADYVVNAMIATAWDIARRFKLRESKVDGKSELPVYNYVS-DANNITWG 389
            ::..:.|.:..||:::|.|.|.|.:||:|       ..|.|  ...:|:||.:..| :.|.:.||
 Worm   262 VLTNMCGSSESKADIIPVDIVANMIIASA-------SYRTS--INTTEIPVIHCSSGELNPLYWG 317

  Fly   390 QYMHLSRKGFHE--PFDKALWCFSYVIIPSKPLHCAIAFFL------HNIPAYILDLIAMVTGQK 446
             ::.|..:.|::  |.::   ||:   :||...|.:.:.||      |:|||.|.|:.|.:.|::
 Worm   318 -HIVLFLEQFYKKYPMEQ---CFA---VPSTYFHKSRSLFLINYYIKHHIPAAISDISARLIGKR 375

  Fly   447 RIYAKAYGKISRIIDMMAWFGLKEWKFAHRNIDELNELLPREERSVLQFNIATINWSEYFRSYLS 511
            :...|.|.|:.::|:.:.:|..:.|.|..|.:.|..|.:...::....|::..::|:.|...|:.
 Worm   376 KNNVKLYSKVWKMIETLHFFTTRGWSFNARGLPEFFEKMTPADQKEYNFDVRQVDWNSYLFDYVM 440

  Fly   512 GIRRYFFKDSANDNKLQQRRTIYRRMLILHTLL-----------------KTTFGLSLIMCMLRV 559
            ||:::..|:  |...|.:.|....:|.|...::                 |||..|:....||..
 Worm   441 GIKKFLLKE--NLENLNRSRAHLLKMRIRRQVIAAIVYAGFISTIGRKWKKTTQYLTWFGAMLAT 503

  Fly   560 Y 560
            |
 Worm   504 Y 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34342NP_001097509.3 PLN02996 70..519 CDD:215538 158/458 (34%)
FAR-N_SDR_e 78..397 CDD:187547 122/320 (38%)
Sterile 429..519 CDD:281068 24/89 (27%)
fard-1NP_001370741.1 FAR-N_SDR_e 13..331 CDD:187547 123/327 (38%)
Sterile 358..448 CDD:397244 24/89 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165454
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.950

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