DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34342 and LOC1278879

DIOPT Version :10

Sequence 1:NP_001097509.3 Gene:CG34342 / 5740152 FlyBaseID:FBgn0085371 Length:572 Species:Drosophila melanogaster
Sequence 2:XP_318525.5 Gene:LOC1278879 / 1278879 VectorBaseID:AGAMI1_011262 Length:486 Species:Anopheles gambiae


Alignment Length:507 Identity:182/507 - (35%)
Similarity:284/507 - (56%) Gaps:61/507 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 SSGTRTNSVDGIAAPFTAAVSATPVTDFYSNATVLITGGTGFVGKVLTEKLLRSFGLRKIYMLIR 110
            :||.|.|.|.                :||.:||:||||||||:||||.|||||.||::.:::|:|
Mosquito    12 TSGERMNCVQ----------------EFYRDATILITGGTGFIGKVLLEKLLRCFGVKTVFLLVR 60

  Fly   111 SKDNMSVQERLKGFFNESIFNRMREESPQ----LLAKVHPIRADYSAIDLDIDSAD-RAMLSSEV 170
            .|.|.:|.|||...|.:.||:.:: .||.    |.|||.||..::.: |..|.|:| :.:|:::|
Mosquito    61 EKCNKTVDERLDEVFEDVIFDAIK-SSPHNGKPLFAKVIPIEVNFQS-DQVISSSDHQRLLAAQV 123

  Fly   171 QIVFNVVASVKFNEKLSDAIDINVLGTKKILDLVMEMKHLKSFVHISTLYCNCNRKFIKEQVYEN 235
            :|||||:|||||||.:..|:|.|||.::|:..|..::.|::|.||:||.|.||:|..|:|::|| 
Mosquito   124 EIVFNVMASVKFNEDIETALDTNVLSSRKLFLLAQQLPHIRSIVHVSTFYSNCHRSHIEERIYE- 187

  Fly   236 EI---GYEKIMQIYRTFDDETLEKMRHCLIGQMPNTYTMTKKCAENLVNHRAFHMPAGIFRPPIV 297
            |:   |:|.|:.::|....:..::::..::|.|||:||.:|:|||.::..:...:|..|||||||
Mosquito   188 ELPFGGFENILALFRHLTPKEKDQLKPIILGPMPNSYTFSKRCAEVMIQQQFSGLPIAIFRPPIV 252

  Fly   298 MSTYKDPFPGWTDNLYGPSGLCTWSARGLVRCIYGKASCKANMVPADYVVNAMIATAWDIARRFK 362
            .|.|.:|.|||.:|..||:|:.....||.|...||......:|||.||.|||::|..|:..:|.:
Mosquito   253 SSAYSEPTPGWVNNFNGPAGMVVPVIRGQVYWCYGADDAAVHMVPVDYCVNALLAVGWENGQRKR 317

  Fly   363 LRE---SKVDGKSELPVYNYVSDANNITWGQYMHLSRKGFHEPFDKALWCFSYVIIPSKPLHCAI 424
            ::|   |||     :|||||....|.:.......|...|......:        |.....:|...
Mosquito   318 MQEPTMSKV-----VPVYNYAFRDNVVRNRDIGALLALGIDSTLGR--------IFGRYTIHVTS 369

  Fly   425 AFFLHN-------IPAYILDLIAMVTGQKRIYAKAYGKISRII---DMMAWFGLKEWKFAHRNID 479
            :.|:..       |.||:.|....:||:|   ||.|..|.|::   |..::|....|...:.||.
Mosquito   370 SLFMRQLFINWLLIQAYVSDTFNKLTGKK---AKNYDLIKRVVALEDSTSYFRCNSWTTENDNIR 431

  Fly   480 ELNELLPREERSVLQFNIATINWSEYFRSYLSGIRRYFFKDSANDNKLQQRR 531
            :|.:.|..:|:.:|.|::.|::|..|||.::.|:     .|:.|.:.|.::|
Mosquito   432 QLWDRLSEDEKRLLPFDVETLDWKYYFRHFVKGV-----ADALNRHCLARQR 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34342NP_001097509.3 FAR-N_SDR_e 78..397 CDD:187547 138/329 (42%)
Sterile 428..519 CDD:460779 28/100 (28%)
LOC1278879XP_318525.5 None

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