DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34342 and LOC1278439

DIOPT Version :10

Sequence 1:NP_001097509.3 Gene:CG34342 / 5740152 FlyBaseID:FBgn0085371 Length:572 Species:Drosophila melanogaster
Sequence 2:XP_318028.5 Gene:LOC1278439 / 1278439 VectorBaseID:AGAMI1_009688 Length:493 Species:Anopheles gambiae


Alignment Length:486 Identity:155/486 - (31%)
Similarity:248/486 - (51%) Gaps:20/486 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 YSNATVLITGGTGFVGKVLTEKLLRSF-GLRKIYMLIRSKDNMSVQERLKGFFNESIFNRMREES 137
            ::.|.|.|||||||:||||.||||||. .:.::::|:|:|...|:::|||...:..:|:.::.|:
Mosquito    13 FAEADVFITGGTGFMGKVLIEKLLRSCPQIARVFVLMRAKRGKSLEDRLKLITDGVLFDMLKREN 77

  Fly   138 PQLLAKVHPIRADYSAIDLDI--DSADRAMLSSEVQIVFNVVASVKFNEKLSDAIDINVLGTKKI 200
            |::|.|:.||..|.:.:.|.:  ||.:|   ..:||.||:..|||:|::.|.|||.||...|:::
Mosquito    78 PEVLKKIQPIEGDCTMLKLGMSPDSMER---MKDVQFVFHAAASVRFDDPLKDAILINTRSTREV 139

  Fly   201 LDLVMEMKHLKSFVHISTLYCNCNRKFIKEQVYENEIGYEKIMQIYRTFDDETLEKMRHCLIGQM 265
            ||....::.|::.||:||.|||.....::|::|..::.:.:.:::...||:..||.::..|....
Mosquito   140 LDWAKTLRKLRAVVHVSTTYCNPELMHVEEKIYPPKMDWREAIRLAEMFDNALLETVKEKLTQFA 204

  Fly   266 PNTYTMTKKCAENLVNHRAFHMPAGIFRPPIVMSTYKDPFPGWTDNLYGPSGLCTWSARGLVRCI 330
            |||||.||..||.:.......:|..:|||.||.:|..:|..||.||..||.||....|.|:||..
Mosquito   205 PNTYTYTKALAEQICYEYRNDIPLVVFRPSIVTNTETEPLMGWVDNFNGPIGLLLGCASGVVRTG 269

  Fly   331 YGKASCKANMVPADYVVNAMIATAWDIARRFKLRESKVDGKSELPVYNYVSD-ANNITWGQYMHL 394
            ......:.|.:|.|..:.|:|..||        :.:..|.:..|||||..:: ...|.:|..::.
Mosquito   270 LLDLEKRINCIPVDVSIKAIIVAAW--------KRATTDEQGTLPVYNSAAEPEKTINYGTMLYD 326

  Fly   395 SRKGF-HEPFDKALWCFSYVIIPSKPLHCAIAFFLHNIPAYILDLIAMVTGQKRIYAKAYGKISR 458
            .:..| ..|....||........:|.....:.|....:||.|:|.:..|.|:.....:...||..
Mosquito   327 GKVLFDRTPLSNMLWAPGGTTTSNKYCFYLVFFCCQLLPAIIVDTLLRVAGKVPFLLRLNRKIFD 391

  Fly   459 IIDMMAWFGLKEWKFAHRNIDELNELLPREERSVLQFNIATINWSEYFRSYLSGIRRYFFKDSAN 523
            ....:.:|...||.|...|..||...|..::|.....|.......||:.|.:.|.|||..|:.  
Mosquito   392 AQVSLRYFMNNEWVFKTENFKELEYTLTADDRKDFSTNYFVRGMMEYYESAILGGRRYLLKEP-- 454

  Fly   524 DNKLQQRRTIYRRMLILHTLLKTTFGLSLIM 554
            |..:......|:|:.:|:..||  |.||.::
Mosquito   455 DENIAYALKKYKRLRVLNYTLK--FALSFLI 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34342NP_001097509.3 FAR-N_SDR_e 78..397 CDD:187547 113/322 (35%)
Sterile 428..519 CDD:460779 25/90 (28%)
LOC1278439XP_318028.5 None

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