DRSC/TRiP Functional Genomics Resources

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Protein Alignment kmr and Plekha2

DIOPT Version :9

Sequence 1:NP_001097775.2 Gene:kmr / 5740131 FlyBaseID:FBgn0085412 Length:3090 Species:Drosophila melanogaster
Sequence 2:XP_003751669.2 Gene:Plekha2 / 684785 RGDID:1586710 Length:425 Species:Rattus norvegicus


Alignment Length:330 Identity:77/330 - (23%)
Similarity:132/330 - (40%) Gaps:79/330 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   302 YIQQNHPN------HVVNQACQTQISAVKPKATPSSEESSSNSTKSPSHAPLDRKKSA------- 353
            ::|.|...      ..:|||  ::|:..|....|.:.|...|.|..|:   |::|...       
  Rat    92 FLQANDQKDLKDWVEALNQA--SKITVPKAGTVPVATEVLKNLTAPPT---LEKKPQVAYKTEII 151

  Fly   354 GSIQALKSPITK-----------------------------RPPSTPVTL-SGWLHKQGSDGLKV 388
            |.: .:::||::                             ||||.|..: ||:..||| :..|.
  Rat   152 GGV-VVQTPISQNGGDGPEGSEPGTHAFLRRSQSYVPTSGCRPPSGPSLIKSGYCVKQG-NVRKS 214

  Fly   389 WRKRWFVLAEYCLYYYKGPEEEKLLGSVLLPS-YRVSACLPE--DKIYRKFAFKCEHQNMRTYWL 450
            |::|:|.|.::.:.|:|..::.:.|.::.|.. .:...||.:  |.:.|...|:. ....||:::
  Rat   215 WKRRFFALDDFTICYFKCEQDREPLRTIPLKDVLKTHECLVKSGDLLMRDNLFEI-ITTSRTFYV 278

  Fly   451 AADNSEAMMQWVRALAAASLMQAPSSGESEPSVNSSLNHSGENSD---SGIHTLQSHPGKGQPTP 512
            .||:.|.|..|:..:.||  :||......|||.:.|::.....|.   ||.:::.|.  :..|..
  Rat   279 QADSPEDMRSWIEGIGAA--VQALKCHPREPSFSRSISLPRPGSSGLTSGPNSILSR--RRPPAE 339

  Fly   513 SSENTGSSGGGSGSGQP-----------LYA-NAP------PKPRRINDGGYSSPSPEHNEQQQQ 559
            .......:...:.|.||           |.| |||      |.|...|..|..:.|...:..:.|
  Rat   340 EKRALCKAPSMASSWQPWTPVPQAKEKLLSAENAPEDSLFMPNPGESNATGALASSRVRHRSEPQ 404

  Fly   560 HPSRR 564
            ||..:
  Rat   405 HPKEK 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kmrNP_001097775.2 PH_PEPP1_2_3 366..469 CDD:270068 32/106 (30%)
PH 372..469 CDD:278594 27/100 (27%)
Plekha2XP_003751669.2 PH1_TAPP1_2 1..119 CDD:270089 6/28 (21%)
PH2_TAPP1_2 192..306 CDD:270090 35/117 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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