DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kmr and plekha6

DIOPT Version :9

Sequence 1:NP_001097775.2 Gene:kmr / 5740131 FlyBaseID:FBgn0085412 Length:3090 Species:Drosophila melanogaster
Sequence 2:XP_021335504.1 Gene:plekha6 / 568764 ZFINID:ZDB-GENE-140106-14 Length:1230 Species:Danio rerio


Alignment Length:1452 Identity:291/1452 - (20%)
Similarity:476/1452 - (32%) Gaps:496/1452 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 YAQQQQLQQQLHQQQQQQQQLQQQQ--QQHRHKN---------DLQTPGSEHGTVYIQQNHPNHV 311
            ::|.||||:   .|......:..||  |.|..:|         ||:..|...|         ...
Zfish    29 FSQPQQLQK---SQNDPNGTVGHQQVIQTHLEENGPLKALLSSDLEMNGKAGG---------RGP 81

  Fly   312 VNQACQ--------TQISAVKPKATPSSEESSSNSTKSPSHAPLDRKKSAGSIQALKSPITKRPP 368
            ||:|.:        :.:|.|.|..     ::.:..|::|..|....|:|..         .:|.|
Zfish    82 VNKASEANSNGNNLSMVSEVPPDG-----QNHTRGTRTPKRAATFGKRSNS---------MRRNP 132

  Fly   369 STPVTLSGWLHKQGSDGLKVWRKRWFVLAEYCLYYYKGPEEEKLLGSVLLPSYRVSACLPEDKIY 433
            :..|:..|||:||.|.|:|.|.||||||.:.||:|||..:||.:|||:.|.|:::......|.|.
Zfish   133 NAEVSRQGWLYKQASSGVKQWNKRWFVLTDRCLFYYKDEKEEGVLGSLPLLSFKIGPVQTSDSIT 197

  Fly   434 RKFAFK------------------------C---EHQNMRTYWLAADNSEAMMQWVRALAAASLM 471
            ||||||                        |   ||...|||:.:||:.:...:|::|::.|:.:
Zfish   198 RKFAFKVWCETEEEEEEEEESEDLKGSIAFCLQVEHAGTRTYYFSADSQKEQEEWIQAMSEAARV 262

  Fly   472 QAPSSGES------------------EPSVNSSLNHSGENSD---------SGIHTLQSHPGKGQ 509
            ..|::..|                  ||  .|...::|:..|         :|:.|..:.|.. .
Zfish   263 HIPTTPRSKSNPIPAADQNDMVAKRLEP--KSHAENNGQCPDLHEPVKHELNGLETRDTTPST-P 324

  Fly   510 PTPSSENTGSSGGGSGSGQPLYANAPPKPRRINDGGYSSPSPEHNEQQQQHPSRRLMSPTQQLYQ 574
            .||.:.||....|..|...|.:.|           |:.:..|                |....||
Zfish   325 VTPVTPNTDGRMGEKGGLGPHHPN-----------GWGNYGP----------------PNGSRYQ 362

  Fly   575 QQQHQRSQQQQQQQPQQHHAIYDTRTGHVSTALQLQQAQQQYSLDHLEAQFQQQQLDMEEQIARL 639
            .|::.|    ..::|...:.:  .|.|.|                                    
Zfish   363 SQENVR----DMREPMDENVV--MRRGFV------------------------------------ 385

  Fly   640 QQQRAAEEIYGEREMYMAKLMQQRQGPNGTYPTQQQLLQAERRTPDAYGRSKQQRLFAAAAAAAD 704
              .|.|.|...:|:..|.:|             ||.:.|.....|...|||..:.........||
Zfish   386 --PRTAPERLAQRKSSMTQL-------------QQWVNQRRALVPQDDGRSPSRYYTVNRGMPAD 435

  Fly   705 YEDIYNMSQLAGGGGVPMSAQ----------EALLQEAASYRRPLSPPSYDGSKHVPAMPQRYTP 759
            |..:|        ||.|...:          |::...:|:|.|| ||              |:|.
Zfish   436 YYGVY--------GGAPYVDEYPLYPPGVRPESICSMSAAYNRP-SP--------------RWTV 477

  Fly   760 NHLEASAADQLINTMDLRARTAAAIVRPHSADFLEYEARAEAAAAAAAAAVAQSQQESGRAPRPK 824
            .....|..|   ..:..:.|....::.|.:.   .|..:.::|        ..|.:.....||.:
Zfish   478 EERRRSLRD---GPLYGQPRDPQWMMGPQAP---SYYPQLDSA--------QNSMRRLSIQPRSR 528

  Fly   825 SSLDINRTPDSFYYSEASYADKMRKSALYLQSGGAGAAQPQQPGSY----RTTGADFNSGVNTIG 885
            |   :.|:|.|                   .|||     |..|.|:    |:..|.|:.|...|.
Zfish   529 S---VPRSPSS-------------------SSGG-----PYSPHSFASPARSPSARFDRGPARIR 566

  Fly   886 YENPY--ERAYKRQELLAEAQGGGASSMPRMSRSASQGRSVASQLQSPQQEDLPPLNVHPGSIFP 948
            .|..|  ...|.    |..:........|...||.|||....:...||        ::|      
Zfish   567 DEGIYADPSVYG----LRRSMSSPKYDFPGDRRSYSQGMYQYNYPASP--------SLH------ 613

  Fly   949 PSMSTQEIISKNEQFLRSASARLPKRSGGMDDDYSAGN---STTT------SPTGGAGASNSPQH 1004
                     ||.|..|   .|:|.:....:|...:.|:   |..|      ||.....:...|.|
Zfish   614 ---------SKMEDIL---DAQLQRNLEYLDQQMTDGDHLISMVTRMVERSSPRPKLFSQVPPFH 666

  Fly  1005 NLDG---------ERKREESMKRLLEWKQRMLQSPLTRKGIQQGGSNMSAMSKLGSNPNILLAST 1060
            ::.|         |.:..:.:.||.| :.|:|:.       |:...:...|.| .|...:|:|:.
Zfish   667 DVYGDLHPTLKLNEIETSKLLGRLCE-QNRLLKE-------QETVVHRLRMEK-DSLEGVLVATH 722

  Fly  1061 AVASGARYAP------QAGKTVLVG---NGNGTAQGAGNPPSASGIQRSRSESQAN--------- 1107
            ......|..|      |..|..|..   |..|....|.:..:.:.::....|...|         
Zfish   723 QEMELYRNQPLVMEKLQLKKESLQNKLINIRGELSQASSALTTTRVEFEALEDDVNAIHGDLWEQ 787

  Fly  1108 VGPGG------------------VVYNNYSSDDEAGTVDDDNLYSATAGRSSSSKTTTKATTSQA 1154
            :..||                  |:...:.::...||  |...:...:|.|.|..|.:.|:...:
Zfish   788 LNAGGQSELVHRHIQKEFWRVQDVLEGLHKNNPSRGT--DTAKHRVASGASGSFSTNSPASPLSS 850

  Fly  1155 IVATTTAALAITNLGSSKNLETPNQTETEATPSSSSTASSTKAKFQLKPILKVHEASKTRIIQVQ 1219
             |:.|:.....:.:..|:...|.:....||.|.......|      .:|:    |:|::....|.
Zfish   851 -VSLTSPLSPFSPVPGSQPSPTKHLATEEAIPPRPPLPKS------YQPL----ESSQSFPPSVP 904

  Fly  1220 PKHLEERPKLRLQLPKAMG-----------------------NEEEQKQEDEEQEN---VEAEPV 1258
            |..|:.....|     :||                       |.:.:|..|.|.|.   .....|
Zfish   905 PLPLDSNAWQR-----SMGRNSGIHQEGYKDDGDFHSRKHNYNSQGEKTSDFETEQDRLSNQNKV 964

  Fly  1259 PILPKKTAPKSPQNANYVPVYNNKLVSNYENMEFGKPIPESKIPHSNAAITDPEET--PMLMQLK 1321
            .|:|.:|  |||....     ||.......|         .|:|:.:.:...|:..  |..::.|
Zfish   965 GIVPPRT--KSPSEEK-----NNSDAVQRRN---------GKVPNGHISRERPKSAVFPAEVKSK 1013

  Fly  1322 LFKEQQDQQKQQQENEEEDLTPTAESKPIPGEEDMGAPKVIKDQKLESN-EEEQELEDEDDSTAC 1385
            :..|:|:::.::.::..                       ::|::...| ...|.::....||:.
Zfish  1014 MSVEEQNERIRRNQSSS-----------------------VRDKRRSLNLSSNQHIDGFKSSTSY 1055

  Fly  1386 ----EEYTDDDID----EALAQDDEDEAVVEAVESQELAEERELQQIYVNEPITPTDQQFDESHY 1442
                ...|.|::|    ||..:.:..|:..|.:.......|.|...:.:::.::..|:......|
Zfish  1056 RVVRRRVTADEVDIKGLEAAVRGEGMESPREEIARLRRQVEPEHYDLDLSKELSMPDKVLIPERY 1120

  Fly  1443 LPMTP-------------KKVELGQPGVLTLVSATYAEE---------------EEENHYVEMTK 1479
            |.|.|             ||||    .:.||::.:..:.               |::.|  |..|
Zfish  1121 LDMEPNTPLSPEELREKQKKVE----RIKTLIAKSNLQNVVPVLDGPVEGPSNPEQQLH--EQEK 1179

  Fly  1480 GIQDEDCRSNYEIMCLASTSSS 1501
            .|         ||.|..:..:|
Zfish  1180 RI---------EISCALAAEAS 1192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kmrNP_001097775.2 PH_PEPP1_2_3 366..469 CDD:270068 48/129 (37%)
PH 372..469 CDD:278594 46/123 (37%)
plekha6XP_021335504.1 PH_PEPP1_2_3 130..260 CDD:270068 48/129 (37%)
SMC_N <622..>775 CDD:330553 31/161 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12752
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.100

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