DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kmr and osbp

DIOPT Version :9

Sequence 1:NP_001097775.2 Gene:kmr / 5740131 FlyBaseID:FBgn0085412 Length:3090 Species:Drosophila melanogaster
Sequence 2:XP_017210757.1 Gene:osbp / 564372 ZFINID:ZDB-GENE-090312-18 Length:818 Species:Danio rerio


Alignment Length:875 Identity:170/875 - (19%)
Similarity:286/875 - (32%) Gaps:252/875 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   340 KSPSHAPLDRKKSAGSIQALKSPITKRPPSTPVTLSGWLHKQGSDGLKVWRKRWFVLAEYCLYYY 404
            |:|:.||.|                        |..|||.| .::.:|.:::|||||:...|.||
Zfish     5 KAPTPAPGD------------------------TYKGWLFK-WTNYIKGYQRRWFVLSNGLLSYY 44

  Fly   405 KGPEE--EKLLGSVLLPSYRVSACLPEDKIYRKFAFKCEHQNMRTYWLAADNSEAMMQWVRAL-- 465
            :...|  ....|::.|.:..::.   ||..    .|...:...:||.|.|.:.....:|:.||  
Zfish    45 RTQAEMGHTCRGTINLATANIAV---EDSC----NFVISNGGTQTYHLKASSEVERQRWITALEL 102

  Fly   466 --AAASLMQAPSSGESEPSVNSSLNHSG--ENSD--SGIHTLQS--------------HPGKGQP 510
              |.|..|||.|....:.|...:....|  .||:  |.:.||.|              | |....
Zfish   103 AKAKAFRMQAESDDSGDESTPPAAGQGGGARNSEVQSTLRTLGSKVEDLSTCNDLIAKH-GSALQ 166

  Fly   511 TPSSENTGSSGGGSGSGQPLYANAPPKPRRINDGGYSSPSPEHNEQQQQHPSRRLMSPTQQLYQQ 575
            ...||..|...||..|.:...........||......:...:.....|.| |:|.....|.  ::
Zfish   167 RSLSELEGVRLGGETSEKIRQVTERATLFRITSNAMINACRDFLALAQAH-SKRWQKALQA--ER 228

  Fly   576 QQHQRSQQQQQQQPQQHHAIYDTRTGHVSTALQ----LQQAQQQYSLDHL--------------E 622
            :|..|.::..:|..:||:        |:..|.:    |..:|...::|..              |
Zfish   229 EQRVRLEETLEQLAKQHN--------HLERAFRGATVLPPSQSNPAIDSKGSVPGKGDASDEDEE 285

  Fly   623 AQFQQQQLDMEEQI---ARLQQQRAAEEIYG-EREMYM----AKLMQQRQGPNGTYPTQQQLLQA 679
            .:|.....|::|.|   |..:..|:...:.| ..||.|    ..|.:|....|...|..|:::..
Zfish   286 NEFFDACEDVQEFITVPADPKYHRSGSNVSGISSEMGMDDGTTSLDEQSMASNPESPQSQEVVPV 350

  Fly   680 -ERRT--PD--------------AYGR-------------------------------------- 689
             :|||  ||              ..|:                                      
Zfish   351 RKRRTRIPDKPNYSLNLWSIMKNCIGKELSKIPMPVNFNEPLSMLQRLSEDLEYYELLDRGAKCQ 415

  Fly   690 -SKQQRLFAAAAAAADYE---------------DIYNMSQLAGGG----------GVPMSAQEAL 728
             |.:|..:.||...:.|.               :.:.:.:|...|          ..|.:|..|:
Zfish   416 SSLEQMCYVAAFTVSSYSTTVHRTGKPFNPLLGETFELDRLQESGYRSLCEQVSHHPPAAAHHAI 480

  Fly   729 LQEAASYRRPLSPPSYDGSKHVPAMP------------QRYTPNHLEASAADQLINTMDLRARTA 781
            .:...:.|:.::..|....|::..||            ..||...:..:..:.::..:.:.....
Zfish   481 SERGWTLRQEIALASKFRGKYLSIMPLGSIHCIFEKSNNHYTWKKVTTTVHNIIVGKLWIDQSGE 545

  Fly   782 AAIVRPHSAD-----FLEYEARAEAAAAAAAAAVAQSQQESGRAPRPKSSLDINRTPDSFYYSEA 841
            ..||...:.|     |..|...:...|......|.   .:.|:|               .|....
Zfish   546 IDIVNHRTGDRCHLKFAPYSYFSRDVARKVTGVVT---DKDGKA---------------HYVLSG 592

  Fly   842 SYADKMRKSALYLQS-GGAGAAQPQQPGSYRTTGAD--FNSGVNTIGYENPYERAYKRQEL-LAE 902
            ::.:||..|.:...| ||...|..:|...|:|..|.  :.......|.||.|  .:....| |.|
Zfish   593 TWDEKMECSRVMQSSRGGENGADGRQKTVYQTLKAKELWRKTPLPEGAENMY--YFSTLALTLNE 655

  Fly   903 AQGGGASSMPRM---SRSASQGR-----SVASQLQSPQ------QEDLPPLNVHPGSIFPPSMST 953
            .:.|.|.:..|.   .|...|||     :...:|:..|      :|.....:.:|.....|:...
Zfish   656 PEEGVAPTDSRKRPDQRLMEQGRWEEANAEKQRLEEKQRTARREREREANRSANPEEGKEPADGA 720

  Fly   954 QEIISKNEQFLRSASARLPKRSGGMDDDYSAGNSTTTSPTGGAGASNSPQHNLDG------ERKR 1012
            :|:     :.....|....|..   .|:.|:..|.:|....|   |:.|.::::|      :...
Zfish   721 EEV-----EIATEPSETTDKTD---TDETSSDLSLSTETLHG---SHPPSYSMEGPYGAPVKSGH 774

  Fly  1013 EESMKRLLEWKQRMLQSPLTRK--GIQQGG 1040
            ::|.|.:  |..|.: .|:|.:  .|.:||
Zfish   775 QDSYKAM--WFDRCV-DPMTGEPTHIYRGG 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kmrNP_001097775.2 PH_PEPP1_2_3 366..469 CDD:270068 28/108 (26%)
PH 372..469 CDD:278594 28/102 (27%)
osbpXP_017210757.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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