DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kmr and si:dkey-191m6.4

DIOPT Version :9

Sequence 1:NP_001097775.2 Gene:kmr / 5740131 FlyBaseID:FBgn0085412 Length:3090 Species:Drosophila melanogaster
Sequence 2:XP_683216.5 Gene:si:dkey-191m6.4 / 555573 ZFINID:ZDB-GENE-121214-182 Length:696 Species:Danio rerio


Alignment Length:964 Identity:168/964 - (17%)
Similarity:289/964 - (29%) Gaps:351/964 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 SPSHAPLDRKKSAGSIQALKSPITKRPPSTP----VTLSGWLHKQGSDGLKVWRKRWFVLAEYCL 401
            ||......|.:|...:....|..:.||.|..    |..:|||.||.|. :|.|:.|||||....|
Zfish     6 SPKIRQTRRARSKSMVMGEASRGSCRPTSPSLQEGVLKAGWLKKQRSI-MKNWQLRWFVLRADHL 69

  Fly   402 YYYKGPEEEKLLGSVLLPSYRVS--ACLPEDKIYRKFAF---------KCEHQNMRTYWLAADNS 455
            ::||..||.|..|.:.|...:|:  ...||:.....|..         ...|:   ::.|.|:..
Zfish    70 FFYKDEEETKPQGCISLKGSQVNELTANPEEPGRHLFEILPAGEKDKAAMSHE---SFLLMANTQ 131

  Fly   456 EAMMQWVRALAAASLMQAPSSGESEPSVNSSLNHSGENSDSGIHTLQSHPGKGQPTPSSENTGSS 520
            ..|..||:|:  ..::.||.                                             
Zfish   132 SDMDDWVKAI--RRVIWAPF--------------------------------------------- 149

  Fly   521 GGGSGSGQPLYANAPPKPRRINDGGYSSPSPEHNEQQQQHPSRRLMSPTQQLYQQQQHQRSQQQQ 585
             ||...||           |:.|                         |.|              
Zfish   150 -GGGIFGQ-----------RLED-------------------------TVQ-------------- 163

  Fly   586 QQQPQQHHAIYDTRTGHVSTALQLQQAQQQYSLDHLEAQFQQQQLDMEEQIARLQQQ----RAAE 646
                      |:.:.|.....|.::|.     :|.:    ::|.|| ||.:.|:..|    :..:
Zfish   164 ----------YERKFGPRLAPLLVEQC-----VDFI----REQGLD-EEGLFRMPGQANLVKELQ 208

  Fly   647 EIY--GEREMYMAKLMQQRQGPNGTYPTQQQLLQAE-RRTPDAYGRSKQQRLFAAAAAAADYEDI 708
            |.:  |::..:         ..|....|...||:.. |..|:            .......|||.
Zfish   209 EAFDCGDKPQF---------DSNTDVHTVASLLKLYLRELPE------------PVVPFCKYEDF 252

  Fly   709 YNMSQLAGG---------GGVPMSAQEA---LLQEAASYRRPLSPPSYDGSKHVPAMPQRYTPNH 761
            ...:||...         |.:.|:...|   ||:....:...:...|::....|..:...:.||.
Zfish   253 LTCAQLLTKDEEEGIQELGKLVMTLPAANFNLLKYICKFLDEVQSHSHENKMGVQNLATVFGPNM 317

  Fly   762 LEASAAD--QLINTMDLRARTAAAIVRPHSADFLEYEARAEAAAAAAAAAVAQSQQESGRAPRPK 824
            |.....|  .::....|.......::..|...:.|.::.         |:..|::.::.:..:|.
Zfish   318 LRPKMEDPVAIMEGTSLVQHLMTVLISEHDRLYTEKDSE---------ASQTQTEDQNQQQNQPS 373

  Fly   825 SSLDINRTPDSFYYSEASYADKMRKSALYLQSGGAGAAQPQQPGSYRTTGADFNSGVNTIGYENP 889
            :.:|        :.||..           |.:.|...|: ..|.|...:..|   ||:|      
Zfish   374 TLVD--------WISEED-----------LNTTGPPTAK-NDPSSSSASSVD---GVST------ 409

  Fly   890 YERAYKRQELLAEAQGGGASSMPRMSRSASQGRSVASQLQSPQQEDLP--PLNVHPGSIFPPSMS 952
                                     |::..||:...:...|.|.:.||  ....:.||       
Zfish   410 -------------------------SKTMPQGKGETAVSPSKQPKTLPGWKYTFNKGS------- 442

  Fly   953 TQEIISKNEQFLRSASARLPKRSGGMDDDYSAGNSTTTSPTGGAGASNSPQHNLDGERKREE-SM 1016
                         |...:..|.||...|..|:||..    ..|..:....:....|||.|:. |.
Zfish   443 -------------SPRPQSAKVSGSAVDVSSSGNWL----MNGLSSLRGHRRTSSGERSRDSGSS 490

  Fly  1017 KRLLEWKQRMLQSPLTRKGIQQGGSNMSAMSKLGSNPNILLASTAVASGARYAPQAGKTVLVGNG 1081
            :||..:                  .|:::.|.|||..::.....:.:|.....|.:|...|    
Zfish   491 QRLSTY------------------DNVTSSSSLGSVLSMDSTPWSSSSCEISVPDSGSDPL---- 533

  Fly  1082 NGTAQGAGNPPSASGIQRSRSESQANVGPGGVVYNNYSSDDEAGTVDDDNLYSATAGRSSSSKTT 1146
             ||..|....||                    |....::|||..:...::  |:...|:|....:
Zfish   534 -GTEDGPQTEPS--------------------VLEERTTDDETKSTGQED--SSAEHRASGLFRS 575

  Fly  1147 TKATTSQAIVATTTAALAITNLGSSKNLETPNQTETEATPSSSSTASSTKAKFQLKPILKVHEAS 1211
            .....:..::....                        ..:..||:|......:||..|:..:.:
Zfish   576 DNGNAAAPLIRVVD------------------------EDADESTSSLVNVVAELKEELRAQKQT 616

  Fly  1212 -KTRIIQVQPK------HLE------ERPKLRLQLPKAMGNEEEQKQEDEEQEN 1252
             ::||.:::..      |:|      |:.:.|.::.:......|:.:||.|..|
Zfish   617 YESRIKKLEESNTALCAHMERLEQEMEQDRKRKRMLEIKLRNSERAREDAENRN 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kmrNP_001097775.2 PH_PEPP1_2_3 366..469 CDD:270068 36/117 (31%)
PH 372..469 CDD:278594 33/107 (31%)
si:dkey-191m6.4XP_683216.5 PH-like 39..152 CDD:302622 36/164 (22%)
PH 41..145 CDD:278594 33/109 (30%)
RhoGAP_ARHGAP22_24_25 152..350 CDD:239855 44/288 (15%)
GBP_C <601..680 CDD:303769 14/70 (20%)
coiled coil 651..662 CDD:293879 1/10 (10%)
coiled coil 670..680 CDD:293879 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.