DRSC/TRiP Functional Genomics Resources

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Protein Alignment kmr and Plekhs1

DIOPT Version :9

Sequence 1:NP_001097775.2 Gene:kmr / 5740131 FlyBaseID:FBgn0085412 Length:3090 Species:Drosophila melanogaster
Sequence 2:NP_001128085.1 Gene:Plekhs1 / 499377 RGDID:1559884 Length:469 Species:Rattus norvegicus


Alignment Length:563 Identity:109/563 - (19%)
Similarity:169/563 - (30%) Gaps:231/563 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 WRKRWFVLAE-----YCLYYYK------------------GPEEEKLLGSVLLPSYRVSACLPED 430
            |:||.|:|::     ..|.|||                  |...::.:.||    .::..|.|::
  Rat    42 WKKRLFILSQSQGKGLSLSYYKDHHRRGSIEIDGSATVEVGINSQEKMQSV----QKMFKCHPDE 102

  Fly   431 KIYRKFAFKCEHQNMRTYWLAADNSEAMMQWVRALAAASLMQAPSSGESEPSVNSSLNHSGENSD 495
            .:       |.....|.|:|...:.|.:..||      |.|.....|     |.::...:.|.  
  Rat   103 VM-------CIRTVTRDYFLIGRDREKIKDWV------SFMTPYCRG-----VKATHQRAEEK-- 147

  Fly   496 SGIHTLQSHPGKGQPTPSSENTGSSGGGSGSGQPLYANAPPKPRRINDGGYSSPSPEHNEQQQQH 560
                     |..|...|.|:.:...|         ..|.|.        |.|..||         
  Rat   148 ---------PSLGDRRPVSDPSPFLG---------LCNIPE--------GISLASP--------- 177

  Fly   561 PSRRLMSPTQQLYQQQQHQRSQQQQQQQPQQH-HAIYDTRTGHVSTALQLQQAQQQYSLDHLEAQ 624
               |...|...:      |:|.|:.:|....| |..|...|         |.|:           
  Rat   178 ---RASLPEHLI------QKSLQRFRQDHYHHEHDFYSEPT---------QDAE----------- 213

  Fly   625 FQQQQLDMEEQIARLQQQRAAEEIYGEREMYMA-KLMQQRQGPNGTYPTQQQLLQAERRTPDA-- 686
                                      |.|.|:. :.::...|.|.:..:      ||..:||.  
  Rat   214 --------------------------EEEYYLTPRSLENIDGANDSGDS------AESNSPDQGF 246

  Fly   687 ------YGRSKQQR---LFAAAAAAADYEDIYNMSQLAGGGGVPMSAQEALLQEAASYRRPLSPP 742
                  |...:..|   :..|.:|.||.:..:.:|        |.:::             |.||
  Rat   247 KRAESNYVSMRSMRSCLVKEATSAPADCQAEFQIS--------PETSE-------------LGPP 290

  Fly   743 SYD---GSKH--VPAMPQRYTPNHLEASAA------DQLIN--TMDLRARTAAAIVRPHSADFLE 794
            ..:   ||..  :||..:..|.:..:.||:      ..|:|  |.:.:..|....:.|.  |.:.
  Rat   291 HQEQDTGSDPCLLPADSEAQTTDDQQGSASLTVVKLSILLNNITDESQVETLNVFLSPR--DVIN 353

  Fly   795 YEARAEAAAAAAAA-------------------AV----AQSQQE-----SGRAPRPKSSLDINR 831
            |.|..|||.....|                   ||    .||.:|     :....:.|..|.|.|
  Rat   354 YLALVEAAGRICVARWEGPPRLGCLFHHGDHILAVNDLKPQSLEEVSLFLTRCIQKEKVKLSIGR 418

  Fly   832 TPDSFYYSEASYADKMR--KSALYLQSGGAGAAQPQQPGSYRT 872
            .|:|         :|:.  ..|..|:...|.:||...||..||
  Rat   419 IPNS---------EKLHAFPCACSLRHQFAESAQQDLPGRERT 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kmrNP_001097775.2 PH_PEPP1_2_3 366..469 CDD:270068 21/102 (21%)
PH 372..469 CDD:278594 21/102 (21%)
Plekhs1NP_001128085.1 PH-like 20..127 CDD:302622 19/95 (20%)
PH 21..128 CDD:278594 21/102 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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