DRSC/TRiP Functional Genomics Resources

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Protein Alignment kmr and Plek

DIOPT Version :9

Sequence 1:NP_001097775.2 Gene:kmr / 5740131 FlyBaseID:FBgn0085412 Length:3090 Species:Drosophila melanogaster
Sequence 2:NP_001020921.1 Gene:Plek / 364206 RGDID:1308269 Length:350 Species:Rattus norvegicus


Alignment Length:94 Identity:27/94 - (28%)
Similarity:39/94 - (41%) Gaps:4/94 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   376 GWLHKQGSDGLKVWRKRWFVLAEYCLYYYKGPEEEKLLGSV-LLPSYRVSACLPEDKIYRKFAFK 439
            |:|.|:|| ....|:..|.||.|..:.:||...:....|.: |..|...|.|  :|...|.|..|
  Rat     9 GYLVKKGS-VFNTWKPMWVVLLEDGIEFYKKKSDNNPKGMIPLKGSTLTSPC--QDFGKRMFVLK 70

  Fly   440 CEHQNMRTYWLAADNSEAMMQWVRALAAA 468
            ......:.::..|...|....|||.:..|
  Rat    71 ITTTKQQDHFFQAAYLEERDAWVRDIKKA 99

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kmrNP_001097775.2 PH_PEPP1_2_3 366..469 CDD:270068 27/94 (29%)
PH 372..469 CDD:278594 27/94 (29%)
PlekNP_001020921.1 PH1_Pleckstrin_2 3..110 CDD:270113 27/94 (29%)
PH 6..101 CDD:278594 27/94 (29%)
DEP_PLEK1 125..223 CDD:239892
PH2_Pleckstrin_2 239..346 CDD:270114
PH 245..347 CDD:278594
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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