DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kmr and Plekha4

DIOPT Version :9

Sequence 1:NP_001097775.2 Gene:kmr / 5740131 FlyBaseID:FBgn0085412 Length:3090 Species:Drosophila melanogaster
Sequence 2:NP_954532.1 Gene:Plekha4 / 308584 RGDID:735133 Length:779 Species:Rattus norvegicus


Alignment Length:901 Identity:222/901 - (24%)
Similarity:332/901 - (36%) Gaps:287/901 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 IQQNHPNHVVNQACQTQISAVKPKATPSSEESSSNSTKSPS------HAPLDRKKSAGSIQALKS 361
            ::|..|        ::.:|.....:|.||  .||.|.|.|:      || ..::.:|        
  Rat     1 MEQGRP--------RSSLSLTSSASTVSS--LSSLSAKKPTRVVHKVHA-FGKRNNA-------- 46

  Fly   362 PITKRPPSTPVTLSGWLHKQGSDGLKVWRKRWFVLAEYCLYYYKGPEEEKLLGSVLLPSYRVSAC 426
              .:|.|:.||.:.||||||.|.||::|::|||||:.:||:|||...||.:|||||||||.|...
  Rat    47 --LRRDPNLPVHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPSYSVRPD 109

  Fly   427 LPEDKIYRKFAFKCEHQNMRTYWLAADNSEAMMQWVRALAAASLMQA-----------PSSGE-- 478
            .|.....|:|.|..||..||||.||||..|.:..|:|||..||..:.           |..||  
  Rat   110 GPGAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGKASRAEGEDCGLPRSPARPRPGEGP 174

  Fly   479 ----SEPSVNSSLNHSGENSDS----------GIHTLQSHPGKG---QPTPSSENTGSSGGGSGS 526
                ..|.||.  ...|..|:|          |.|.:.: ||..   ||...|..|.|....|..
  Rat   175 GGPGGPPEVNR--REEGRTSESPEVAPLSRGPGRHEMHA-PGSSADLQPDTWSRRTRSPEPFSPL 236

  Fly   527 GQPLYANAPPKPRR-------INDGGYSSPSPEHNEQQQ--------QHPSRRLMS----PTQQL 572
            .:|....:.|:||.       ::.|..|.|:..|....:        ..|.|:.:|    |.:..
  Rat   237 SRPPSPLSLPRPRSAPVRRPPLSAGDISFPARPHTPLSRIDVRPPLDWGPQRQTLSRPPIPRRGP 301

  Fly   573 YQQQQHQRSQQQQQQQPQQHHAIYDTRTGHVSTALQL------QQA--------------QQQYS 617
            :.:....|..:..|.:..:|.......:...||.|||      .||              .|...
  Rat   302 FSEAGGGRPPRSPQLRTPEHRTQSTQVSSGSSTYLQLPPRPPGTQASMILLPGPPVDSTLHQSLE 366

  Fly   618 LDHL-------EAQFQQQQLDMEEQIARLQQQRAAEEIYGEREMYMAKLMQQRQGPNGTYPTQQQ 675
            .|.|       :...:|.|.|::::....:|..||.|:                       |:||
  Rat   367 TDTLLTKLCGQDRLLRQLQEDLDKRQEEKEQLEAALEL-----------------------TRQQ 408

  Fly   676 LLQAERR---TPDAYGRSK--QQRLFAAAAA----AADYEDIYN-MSQLAGGGGVPMSAQEALL- 729
            |.||.|.   :..|:||.:  |.||....||    ..:.|.::: .|.|....|......|.|| 
  Rat   409 LGQATREAAASGKAWGRQRLLQDRLVNVRAALCHLTQERERVWDTYSGLEQDLGTLRETLEYLLH 473

  Fly   730 ----QEAASYRRPL---------------SPPSYDGSKHVPAMPQRYTPNHLEASAADQLINTMD 775
                |:.||.::.|               .||..:.....|| |||.     |:|..:.|..:::
  Rat   474 LGSPQDRASAQQQLWMVEDTLAGLGGPQKQPPHTEPKSPSPA-PQRE-----ESSERESLSESLE 532

  Fly   776 LRARTAAAI--VRPHSADFLEYEARAEAAAAAAAAAVAQSQQESGRAPRPKSSLDINRTPDSFYY 838
            |.:..:..:  .:|...|                .|::.||...| :||               .
  Rat   533 LSSPQSPEVDWGQPPGGD----------------RALSSSQSGVG-SPR---------------V 565

  Fly   839 SEASYADKMRKSALYLQSGGAGAAQPQQPGSYRTTGADFNSGVNTIGYENPYERAYKRQELLAEA 903
            |.||..:..::|:..|:: .|..|:|:.                         .|.::.|.:...
  Rat   566 SRASSPECRQQSSPLLRT-KAPLARPRM-------------------------SAQEQLERMRRN 604

  Fly   904 QGGGASSMPRMS--RSASQGRSVASQLQSPQQEDLPPLNVHPGSIFPPSMSTQEIISKNEQFLRS 966
            |..|. |:||.:  |..:.||:::...:.|..|..|                   |....::|||
  Rat   605 QACGL-SLPRPTSPRLLTLGRTLSPVPRQPDMEQRP-------------------IVGAAKWLRS 649

  Fly   967 ASARLPKRSGGMDDDYSAGNSTTTSPTGGAGASNSPQHNLDGERKREESMKRLL-----EWKQRM 1026
                    ||...   |..:|||.||..|            |.|:|..|:.:.|     :|.:.|
  Rat   650 --------SGSWS---SPRHSTTYSPVSG------------GHRERVLSLSQALATEASQWHRLM 691

  Fly  1027 LQSP---LTRKG--IQQGGSNMS-AMSKLGSNPNILLASTAV------ASGARYAP 1070
            ..||   |..:|  :|......| .:.::.|:|....|::|.      .||...||
  Rat   692 TASPERNLDTRGDCLQPSPQPPSEELPQVTSSPTSHKANSATTGFSCQGSGRGLAP 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kmrNP_001097775.2 PH_PEPP1_2_3 366..469 CDD:270068 55/102 (54%)
PH 372..469 CDD:278594 52/96 (54%)
Plekha4NP_954532.1 PH_PEPP1_2_3 49..152 CDD:270068 55/102 (54%)
PH 55..153 CDD:278594 53/97 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 152..355 42/205 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 495..669 53/280 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 694..766 14/54 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 115 1.000 Domainoid score I5871
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003396
OrthoInspector 1 1.000 - - otm45762
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12752
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.010

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