DRSC/TRiP Functional Genomics Resources

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Protein Alignment kmr and Plekha6

DIOPT Version :9

Sequence 1:NP_001097775.2 Gene:kmr / 5740131 FlyBaseID:FBgn0085412 Length:3090 Species:Drosophila melanogaster
Sequence 2:XP_006529597.1 Gene:Plekha6 / 240753 MGIID:2388662 Length:1297 Species:Mus musculus


Alignment Length:1586 Identity:314/1586 - (19%)
Similarity:522/1586 - (32%) Gaps:496/1586 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 QQQQSQQPAMPKHYQEQLYAQQQQLQQQLHQQQQQ---QQQLQQQQQQHRHKNDLQTP------- 294
            |...|..|.:||.:  ::.:..:.....::..:::   :..:..|..:...|.||:|.       
Mouse    46 QSGHSAGPGLPKGW--EMDSTPEGAAYFINHNERRNTFRHPVTGQIPEENKKFDLKTSALDMSNK 108

  Fly   295 --GSEHGTVYIQQNHPNHVVNQACQTQISAVKPKATPSSEESSSNSTKSPSHAPLDRKKSAGSIQ 357
              |....|  |..:..||       ..:|.|.|      |..:..:|:: |...:...|.|.|: 
Mouse   109 TGGKRSAT--INSDIANH-------NMVSEVPP------ERPNIRATRT-SRKAIAFGKRAHSM- 156

  Fly   358 ALKSPITKRPPSTPVTLSGWLHKQGSDGLKVWRKRWFVLAEYCLYYYKGPEEEKLLGSVLLPSYR 422
                   ||.|:.|||.:|||:||.|.|:|.|.||||||.:.||:|||..::|.:|||:.|.|:|
Mouse   157 -------KRNPNAPVTKAGWLYKQASSGVKQWNKRWFVLVDRCLFYYKDEKQESILGSIPLLSFR 214

  Fly   423 VSACLPEDKIYRKFAFK--------------------CEHQNMRTYWLAADNSEAMMQWVRALAA 467
            |:|..|.|.|.||..||                    .||..:|||:.:|::.|....|::|:..
Mouse   215 VAAVQPSDNISRKHTFKVTVHWVDEAGASSTHCLSPQAEHAGVRTYFFSAESPEEQEAWIQAMGE 279

  Fly   468 ASLMQAPSSGESEPSVNSSLNHSGENSDSGIHTLQSHPGKGQPTPSSEN---------TGSSGGG 523
            |:.:|.|.:.:|.|   ..:.||.|..||.    ...|.|....|...|         |...|.|
Mouse   280 AARVQIPPAQKSVP---QPVRHSLEKPDSE----NIPPSKHHQQPPHNNLTKLEPEAKTRGEGDG 337

  Fly   524 SG-------------------------SGQPLYANAPPKP----RRINDGGYSSPSPEHNEQQQQ 559
            .|                         || |..|:.|..|    .|:..||.....|  |..|..
Mouse   338 RGCEKAERRPERPEVKKETLVKANGLPSG-PETASEPGSPYPDGPRVPGGGEHPAQP--NGWQYS 399

  Fly   560 HPSRRLMSPTQQLYQQQQHQRSQQQQQQQPQQHHAIYDTRTGHVSTALQLQQAQQQYSLDHLEAQ 624
            .|||    |....:.........|::...|:       |....:        ||::.|::.|   
Mouse   400 SPSR----PGSTAFPPHDGDSGGQRRSFPPR-------TDPDKI--------AQRKSSMNQL--- 442

  Fly   625 FQQQQLDMEEQIARLQQQRAAEEIYGEREMYMAKLMQQRQGPNGTYPTQQQLLQAERRTPDAYGR 689
              ||.:::...:...:..|:                     |:..||       ..||.||.|..
Mouse   443 --QQWVNLRRGVPPPEDLRS---------------------PSRFYP-------MPRRVPDYYNP 477

  Fly   690 SKQQRLFAAAAAAADYEDIY-----------------------------NMSQLAGGGGVPMSAQ 725
            ...|           |.|.|                             .......|||......
Mouse   478 YSSQ-----------YPDDYQYYPPGVRPDSICSMPAYDRISPPWALEDKRHSFRNGGGPTYQLH 531

  Fly   726 EALLQEAASYRRPLSPPSYDGSKHVPAMPQRYTPNHLEASAADQLINTMDLRARTAAAIVRPHSA 790
            |  .:|:.||.|      .||:..:|: |.|....:.|..||...:..:.|:.|:.:....|...
Mouse   532 E--WKESTSYGR------QDGTVWIPS-PSRQPVFYDELDAASGSLRRLSLQPRSHSVPRSPSQG 587

  Fly   791 DFLEYEARAEAAAAAAAAAVAQSQQESGRAPR-PKSSLDINRTPDSFYYSEASYADKMRKSALYL 854
            .:            :.|...:..:..|.|..| |..|.||       |...|:|.  ||:|....
Mouse   588 SY------------SRARIYSPVRSPSARFDRLPPRSEDI-------YADPAAYV--MRRSISSP 631

  Fly   855 QSGGAGAAQPQQPGSYRTTGADFNSGVNTIGYENPYERAY--------KRQELL-AEAQGGGASS 910
            :....|..:|...|.:                  ||.  |        |..||| .:.|    .:
Mouse   632 KYDYLGDRRPVPAGLF------------------PYN--YPSSPTVHDKMDELLDLQLQ----RN 672

  Fly   911 MPRMSRSASQGRSVASQL------QSPQQEDLPPLNVHPGSIFPPSMSTQEIISKNEQFLRSASA 969
            :..:.:..|:..::.|.:      .||:......:..:| .:|...:.|.::   |||       
Mouse   673 LEYLDQQMSESETLISMVNRMVENSSPRAHLFMQVPAYP-EVFRDGLHTFKL---NEQ------- 726

  Fly   970 RLPKRSGGMDDDYSAGNSTTTSPTGGAGASNSPQHNLDGERKREESMKRLLEWKQRMLQSPL--T 1032
                     |.|...|..             ..|:.:..|::|   :.:.|..::..|:|.|  |
Mouse   727 ---------DTDKLLGKL-------------CEQNKVVREQER---LVQQLRAEKESLESALMGT 766

  Fly  1033 RKGIQQGGSNMSAMSKLGSNPNILLASTAVASGARYAPQAGKTVLVGNGNGTAQGAGNPPSASGI 1097
            .:.::..||..:...||                 .:..::.:..|:                 .|
Mouse   767 HQELEMFGSQPAYPEKL-----------------LHKKESLQNQLI-----------------NI 797

  Fly  1098 QRSRSESQANVGPGGVVYNNYSSDDEAGTVDDD-------NLYSATAGRSSSSKTTTKATTSQAI 1155
            :...|::...:....|||.|..|  |...:.|:       ::.:....|....:........:  
Mouse   798 RVELSQATTALTNSTVVYENLES--EVSALHDELWEQLNLDIQNEVLNRQIQKEIWRIQDVME-- 858

  Fly  1156 VATTTAALAITNLGSSKNLETPNQ-TET---------EATPSSSSTASSTKAKFQLKPILKVHEA 1210
                         |..||  .|:: |:|         .||.||:|.||...:.....|:......
Mouse   859 -------------GLRKN--NPSRGTDTAKHRGGLGPSATYSSNSPASPLSSASLTSPLSPFSMV 908

  Fly  1211 SKTRIIQVQPKHLEERPKLRLQLPKAMGNEEEQKQEDEEQENVEAEPVPILPKKTAPKSPQNANY 1275
            |.::....:|...||....|..||||.                    ||:....|.|..|..:.:
Mouse   909 SGSQGSPTKPGSSEEPGPPRPPLPKAY--------------------VPLESPPTVPPLPNESRF 953

  Fly  1276 VPVYNNKLVSNYENMEFGKPIPESKIPHSNAAITDPEETPMLMQLKLFKEQQDQQKQQQENEEED 1340
            .|..|:...........|:|....:....:.:.|.|..||..:.|...:::.:.:||...|:...
Mouse   954 WPYPNSPSWHRSGETAKGQPKTGYETSKKDPSQTSPLGTPRDINLVPTRQEVEAEKQAALNKVGI 1018

  Fly  1341 LTPTAESKPIPGEEDMGAPKVIKDQKLESNEEEQELEDEDDSTACEEYTDDDIDEALA--QDDED 1403
            :.|..:|   |.||::....|::                        .|.:.:...|:  |:...
Mouse  1019 VPPRTKS---PAEEELTPSAVVR------------------------RTTNGLTNGLSSRQERPK 1056

  Fly  1404 EAVVEAVESQELAEERELQQIYVNEPITPTDQQFDESHYLPMTPKKVELGQPGVLTLVSATYAEE 1468
            .||.......:::.|.::.::..::..:..:::  .|..||.:|......:|..           
Mouse  1057 SAVFSGEGKVKMSVEEQMDRMRRHQSGSMKEKR--RSLQLPASPAPEPSTRPAY----------- 1108

  Fly  1469 EEENHYVEMTKGIQDEDCRSNYEIMCLASTSSSAFKVTTKTEPVYMELAGVKASSAVPATEEAHC 1533
                ..|...:.|.:.|. ||.|....|.........|.:.     |:|.::.....|...:...
Mouse  1109 ----KVVRRHRSIHEVDI-SNLEAALRAEEPGGQAYETPRE-----EIARLRKMELEPQHYDVDI 1163

  Fly  1534 SSGRST------------LKKCKKSGTETLKKKTKKRQGKDMPDILKPAKSALALAS-------- 1578
            |...||            |:.......|.||:|.||         ::..|:.:|.:|        
Mouse  1164 SKELSTPDKVLIPERYIDLEPDTPLSPEELKEKQKK---------VERIKTLIAKSSMQNVVPIG 1219

  Fly  1579 --DSSDA--DDESSRQQLEAKKLRSRSRFSLSDTFRPASYYLGASTPLNNYAESSDSEILPPPPI 1639
              ||.|.  |.||..|:.| |::......:...:.|.....:..:||             .||..
Mouse  1220 EGDSVDVPQDSESQLQEQE-KRIEISCALATEASRRGRMLSVQCATP-------------SPPTS 1270

  Fly  1640 PASP-PPMEELKTEEIFSSEHYDTVK 1664
            |||| ||:..|.::....::...|::
Mouse  1271 PASPTPPVNPLSSDRPRGADSSHTMR 1296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kmrNP_001097775.2 PH_PEPP1_2_3 366..469 CDD:270068 50/122 (41%)
PH 372..469 CDD:278594 47/116 (41%)
Plekha6XP_006529597.1 WW 10..39 CDD:366073
WW 55..84 CDD:366073 2/30 (7%)
PH_PEPP1_2_3 158..281 CDD:270068 50/122 (41%)
dnaA 364..>526 CDD:237605 40/227 (18%)
Mplasa_alph_rch <718..>864 CDD:275316 33/233 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43685
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12752
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4936
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.040

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