DRSC/TRiP Functional Genomics Resources

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Protein Alignment kmr and Cyth2

DIOPT Version :9

Sequence 1:NP_001097775.2 Gene:kmr / 5740131 FlyBaseID:FBgn0085412 Length:3090 Species:Drosophila melanogaster
Sequence 2:NP_035311.1 Gene:Cyth2 / 19158 MGIID:1334255 Length:400 Species:Mus musculus


Alignment Length:111 Identity:31/111 - (27%)
Similarity:52/111 - (46%) Gaps:18/111 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   376 GWLHKQGSDGLKVWRKRWFVLAEYCLYYYKGPEEEKLLGSVLLPSY--------RVSAC----LP 428
            |||.|.|...:|.|::|||:|.:.||||::...:::..|.:.|.:.        |...|    :|
Mouse   264 GWLLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVDDPRKPNCFELYIP 328

  Fly   429 EDKIYRKFAFKCE------HQNMRTYWLAADNSEAMMQWVRALAAA 468
            .:|.....|.|.|      ..|...|.::|...|...:|::::.||
Mouse   329 NNKGQLIKACKTEADGRVVEGNHMVYRISAPTQEEKDEWIKSIQAA 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kmrNP_001097775.2 PH_PEPP1_2_3 366..469 CDD:270068 31/111 (28%)
PH 372..469 CDD:278594 31/111 (28%)
Cyth2NP_035311.1 Sec7 61..243 CDD:396096
PH_GRP1-like 258..378 CDD:269954 31/111 (28%)
C-terminal autoinhibitory region. /evidence=ECO:0000250 387..395
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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