DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp1-Y1 and Ppef1

DIOPT Version :10

Sequence 1:NP_001104152.3 Gene:Pp1-Y1 / 5740113 FlyBaseID:FBgn0261399 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_001421152.1 Gene:Ppef1 / 317498 RGDID:1562772 Length:664 Species:Rattus norvegicus


Alignment Length:288 Identity:94/288 - (32%)
Similarity:146/288 - (50%) Gaps:42/288 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 IIKLLKQARQVLMSEPMLLTVEA----PVNVLGDIHGQYNDLLRYFETSGHPPKKR-YLMLGDYV 99
            ::::|.:||::|...|....::.    .:.:.||:||:.:||:..|..:|.|.:|. |:..||:|
  Rat   164 VLEVLFEARKILKQMPNFTRIQTFPAKEITICGDLHGKLDDLMLIFYKNGLPSEKNPYVFNGDFV 228

  Fly   100 DRGKYSVETLTLLLAYKVRYPTSIHLLRGNHESAAINRYYGFYDECKRRFTI---RLWRMFVDCY 161
            |||..|:|.|.:||...:.|||.:||.|||||...:|..|||..|..:::.:   ::.::..:.|
  Rat   229 DRGNNSMEILMILLVSFLVYPTDLHLNRGNHEDFMMNLRYGFTKEILQKYKLHGKKILQVLEELY 293

  Fly   162 DCLPVAAIINSKIFCCHGGLSPSLHNLNDIQHLQR-------------------------PAEVD 201
            ..||:..||:::|...|||:|.|. :||.:|.|||                         |:|..
  Rat   294 TWLPIGTIIDNEILVIHGGISEST-DLNILQQLQRNKMKSVLMPPMSTNQECNIKKNKAGPSEQS 357

  Fly   202 RNGLL--------CDLLWSDPDPTAIGWEKNSRGVSFTFGVDIVETFLSRFSFDLICRAHQVVED 258
            .:..|        .|||||||......:...|||....||.|:....|::....::.|:|:...|
  Rat   358 ASEQLTKLEWEQIIDLLWSDPRGKKGCYPNTSRGGGCYFGPDVTSKVLNKNQLKMVIRSHECKPD 422

  Fly   259 GYEFFAKRQLITVFSAVNYCGEFDNAGA 286
            |||.....::||||||.||..|..|.||
  Rat   423 GYEICHDGKVITVFSASNYYEEGSNRGA 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-Y1NP_001104152.3 MPP_superfamily 17..303 CDD:472684 94/288 (33%)
Ppef1NP_001421152.1 IQ 40..>57 CDD:197470
MPP_RdgC 140..466 CDD:277364 94/288 (33%)
FRQ1 498..660 CDD:444056
Blue background indicates that the domain is not in the aligned region.

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