DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp1-Y1 and sds21

DIOPT Version :9

Sequence 1:NP_001104152.3 Gene:Pp1-Y1 / 5740113 FlyBaseID:FBgn0261399 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_001342764.1 Gene:sds21 / 2539179 PomBaseID:SPCC31H12.05c Length:322 Species:Schizosaccharomyces pombe


Alignment Length:301 Identity:167/301 - (55%)
Similarity:226/301 - (75%) Gaps:6/301 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LDEMIASLL---SWKIDRKMMVPESDIIKLLKQARQVLMSEPMLLTVEAPVNVLGDIHGQYNDLL 78
            :|.:|..|:   :.|..:::.:.:::|..|...:|.:.:|:||||.:|||:.:.|||||||:|||
pombe     5 IDAIIEKLVKARNGKPSKQVQLSDAEIRYLCTTSRSIFLSQPMLLELEAPLKICGDIHGQYSDLL 69

  Fly    79 RYFETSGHPPKKRYLMLGDYVDRGKYSVETLTLLLAYKVRYPTSIHLLRGNHESAAINRYYGFYD 143
            |.||..|:||...||.|||||||||.|:|.:.||.|||::||.:..|||||||.|:|||.|||||
pombe    70 RLFEYGGYPPDANYLFLGDYVDRGKQSLEVICLLFAYKIKYPENFFLLRGNHEFASINRIYGFYD 134

  Fly   144 ECKRRFTIRLWRMFVDCYDCLPVAAIINSKIFCCHGGLSPSLHNLNDIQHLQRPAEVDRNGLLCD 208
            |||||::|:||:.|.||::|:||||:|:.||||.||||||.|::|:.||.:.||.::...|||||
pombe   135 ECKRRYSIKLWKTFTDCFNCMPVAAVIDEKIFCMHGGLSPDLNSLDQIQRIIRPTDIPDTGLLCD 199

  Fly   209 LLWSDPDPTAIGWEKNSRGVSFTFGVDIVETFLSRFSFDLICRAHQVVEDGYEFFAKRQLITVFS 273
            |:||||:....||.:|.||||:|||.|:|..||.:...|||||||||||||||||.||||:|:||
pombe   200 LVWSDPEKDLTGWGENDRGVSYTFGADVVSRFLQKHDLDLICRAHQVVEDGYEFFGKRQLVTIFS 264

  Fly   274 AVNYCGEFDNAGAMMCVDAELNITLVVMKP---KKRIAFST 311
            |.||||||||.||||.|:.:|..:..::||   ::|::.|:
pombe   265 APNYCGEFDNVGAMMSVNEDLLCSFQILKPAEKRQRVSQSS 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-Y1NP_001104152.3 MPP_superfamily 17..303 CDD:301300 163/288 (57%)
PP2Ac 36..305 CDD:197547 161/271 (59%)
sds21NP_001342764.1 MPP_PP1_PPKL 4..294 CDD:277359 163/288 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11668
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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