DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp1-Y1 and C06A1.3

DIOPT Version :10

Sequence 1:NP_001104152.3 Gene:Pp1-Y1 / 5740113 FlyBaseID:FBgn0261399 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_496276.1 Gene:C06A1.3 / 174626 WormBaseID:WBGene00007354 Length:364 Species:Caenorhabditis elegans


Alignment Length:307 Identity:129/307 - (42%)
Similarity:188/307 - (61%) Gaps:4/307 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKWFFRFQYQMFEKYLDEMIASLLSWKIDRKM----MVPESDIIKLLKQARQVLMSEPMLLTVE 61
            :||:....:.....:::|:.|..:.|...|..:    ::...:||.:::....:.|.|..|...|
 Worm    21 ISKFDLAKENPKLAEWMDDCIKRMNSLYKDTNINICNVMTGHEIISIIRMVEAIFMEESNLCEAE 85

  Fly    62 APVNVLGDIHGQYNDLLRYFETSGHPPKKRYLMLGDYVDRGKYSVETLTLLLAYKVRYPTSIHLL 126
            ||:.|:||||.||.|:.|.|:..|..|:::.:.||||||||...:|.|.||...|:||...|:||
 Worm    86 APIKVIGDIHAQYQDMNRLFDLIGRVPEEKLMFLGDYVDRGPQGIEVLILLFCLKIRYRDRIYLL 150

  Fly   127 RGNHESAAINRYYGFYDECKRRFTIRLWRMFVDCYDCLPVAAIINSKIFCCHGGLSPSLHNLNDI 191
            |||||:.::|:.||||.||:.::.|.||..|..|::.:|::.:|:.::.|.||||||.|.||:.|
 Worm   151 RGNHETPSVNKIYGFYVECQYKYGIGLWWDFQSCFNRMPMSGLISKRVLCMHGGLSPELINLDTI 215

  Fly   192 QHLQRPAEVDRNGLLCDLLWSDPDPTAIGWEKNSRGVSFTFGVDIVETFLSRFSFDLICRAHQVV 256
            :::.||.|....|||.|||||||.....||..:.||:|:.||..:||........|||.||||||
 Worm   216 RNIPRPCEPLDRGLLIDLLWSDPTNKGEGWFHSIRGISYMFGKGVVEQACKSLEIDLIIRAHQVV 280

  Fly   257 EDGYEFFAKRQLITVFSAVNYCGEFDNAGAMMCVDAELNITLVVMKP 303
            :||||....|:||||||..|||.:|.||.|::|::|.|.|:...|.|
 Worm   281 QDGYEMMTGRRLITVFSVPNYCAQFTNAAAVVCLNANLQISFQQMIP 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-Y1NP_001104152.3 MPP_superfamily 17..303 CDD:472684 126/289 (44%)
C06A1.3NP_496276.1 PP2Ac 59..329 CDD:197547 123/269 (46%)

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