DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp1-Y1 and rdgC

DIOPT Version :10

Sequence 1:NP_001104152.3 Gene:Pp1-Y1 / 5740113 FlyBaseID:FBgn0261399 Length:317 Species:Drosophila melanogaster
Sequence 2:XP_061512906.1 Gene:rdgC / 1278280 VectorBaseID:AGAMI1_002189 Length:877 Species:Anopheles gambiae


Alignment Length:318 Identity:98/318 - (30%)
Similarity:154/318 - (48%) Gaps:44/318 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LSWKIDRKMMVPESDIIK-------------LLKQARQVLMSEPML----LTVEAPVNVLGDIHG 72
            :.:.:|:|.:....|:.:             :|::|...|...|.|    ..:...|.:.||:||
Mosquito   212 IKFPLDKKELEVIIDLFRKKKNRLHAKYVAGILREATSKLKRLPNLNQASTAISKQVTICGDLHG 276

  Fly    73 QYNDLLRYFETSGHP-PKKRYLMLGDYVDRGKYSVETLTLLLAYKVRYPTSIHLLRGNHESAAIN 136
            :.:|||..|..:|.| |:..|:..||:|||||..:|.|.|||...:.:|..:.|.|||||...:|
Mosquito   277 KLDDLLVVFHKNGLPSPENPYVFNGDFVDRGKKGLEVLLLLLCTFLVFPGGVFLNRGNHEDTVMN 341

  Fly   137 RYYGFYDECKRRF---TIRLWRMFVDCYDCLPVAAIINSKIFCCHGGLSPSLHNLNDIQHLQ--- 195
            ..|||..|..:::   ..||.::..:.|..||:..|:|:::...|||:|.|. :|:.|:.|.   
Mosquito   342 ARYGFIREVHQKYKHNAERLLKLIDEVYRWLPLGTIVNNRVLVVHGGISDST-DLDLIRSLDRGK 405

  Fly   196 -----RPAEVDRNG------------LLCDLLWSDPDPTAIGWEKNS-RGVSFTFGVDIVETFLS 242
                 ||...:...            .:.|:|||||..|. |...|| ||....||.|:...||.
Mosquito   406 YISLLRPPITESTAPGAEIIDKVEWKQVFDILWSDPQHTE-GCRPNSLRGAGTYFGPDVTSKFLQ 469

  Fly   243 RFSFDLICRAHQVVEDGYEFFAKRQLITVFSAVNYCGEFDNAGAMMCVDAELNITLVV 300
            |:....:.|:|:...||:|.....::||:|||.||.....|.||.:.:|.:|:...|:
Mosquito   470 RYKLQYLVRSHECKPDGHEIMHGGKVITIFSASNYYEIGSNKGAYLKLDPQLDTHFVM 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-Y1NP_001104152.3 MPP_superfamily 17..303 CDD:472684 98/318 (31%)
rdgCXP_061512906.1 None

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