DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp1-Y1 and ppef2

DIOPT Version :10

Sequence 1:NP_001104152.3 Gene:Pp1-Y1 / 5740113 FlyBaseID:FBgn0261399 Length:317 Species:Drosophila melanogaster
Sequence 2:XP_031760727.1 Gene:ppef2 / 100496073 XenbaseID:XB-GENE-956418 Length:781 Species:Xenopus tropicalis


Alignment Length:408 Identity:98/408 - (24%)
Similarity:158/408 - (38%) Gaps:150/408 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 IIKLLKQARQVLMSEPMLLTVEA----PVNVLGDIHGQYNDLLRYFETSGHP-PKKRYLMLGDYV 99
            ::.||.:.::.|...|.:..:..    .:.:.||:||:.:||...|..:|.| |:|.|:..||:|
 Frog   186 VLHLLHETKKYLKQLPNIKRISTSYGKEITICGDLHGRLDDLFLIFYKNGLPSPEKPYIFNGDFV 250

  Fly   100 DRGKYSVETLTLLLAYKVRYPTSIHLLRGNHESAAINRYYGFYDECKRRFTI---RLWRMFVDCY 161
            ||||.|:|.|.:|.|:::.||..:||.|||||...:|..|||..|..:::.:   ::.:|....:
 Frog   251 DRGKQSIEILMILFAFQLVYPKVVHLNRGNHEDYIVNLRYGFTKEVMKKYKVHGKKILKMLQSVF 315

  Fly   162 DCLPVAAIINSKIFCCHGGLS-----------------------------------PS------- 184
            ..||:|.:|:.|:...|||:|                                   ||       
 Frog   316 SWLPLATLIDQKVLVTHGGVSDTTDLEILSKIERHKFASTLRPHKKKEKNKQIGIQPSEGKCPND 380

  Fly   185 --LHNL--------------NDIQHL------QRPAE------VDRNGL---------------- 205
              .|||              :...||      :|.|.      :||..:                
 Frog   381 NKSHNLVATWPSPRSGSFSYSPSPHLIPAYKGKRSASSPTTMTIDRKAISKRVRKSVDEELEKCR 445

  Fly   206 ----------------------------------------LCDLLWSDPDPTAIGWEKNS-RGVS 229
                                                    :.|:|||||.|.. |.:.|: ||..
 Frog   446 RQVGFNQTYVEPDGSASVSESDSESGEMHECDIDDEEKKQIVDILWSDPIPQD-GCKSNTVRGGG 509

  Fly   230 FTFGVDIVETFLSRFSFDLICRAHQVVEDGYEFFAKRQLITVFSAVNYCGEFDNAGAMMCVDAEL 294
            ..||.|:.|..|.:....::.|:|:..::||||....:::|:|||.||.....|.||.:.:..:|
 Frog   510 CYFGPDVTEKILQKHGLQMLIRSHECKQEGYEFCHSGKVLTIFSASNYYEVGSNKGAFVKLGPDL 574

  Fly   295 --------------NITL 298
                          |:||
 Frog   575 VPHFVQYQASRLTNNLTL 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-Y1NP_001104152.3 MPP_superfamily 17..303 CDD:472684 98/408 (24%)
ppef2XP_031760727.1 MPP_superfamily 162..582 CDD:472684 95/396 (24%)
FRQ1 614..773 CDD:444056
EFh 701..767 CDD:238008
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.